Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_611247.3 | Gene: | swi2 / 37010 | FlyBaseID: | FBgn0034262 | Length: | 499 | Species: | Drosophila melanogaster |
Alignment Length: | 426 | Identity: | 88/426 - (20%) |
---|---|---|---|
Similarity: | 155/426 - (36%) | Gaps: | 113/426 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 265 ADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQ 329
Fly 330 ANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQN-----------------KALANFSRLVSLSL 377
Fly 378 RHNQI--------DVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALT 434
Fly 435 SDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCD-----CSIRPF------- 487
Fly 488 -----AEWLQESQLHSSL-SASCVTPPRLEGAPLLQVPVETLSCD-----------MDNVE---- 531
Fly 532 -----------KDNANIMQHLETLAKPNQTSPIKDLSEEIILHELHFSTDYGLILTWLLNLSKKD 585
Fly 586 YMCDAIFVY-------KEEHINEILIDNSPIHCESK 614 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 11/68 (16%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 7/41 (17%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 2/6 (33%) | ||
LRR_RI | <270..479 | CDD:238064 | 51/233 (22%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 3/24 (13%) | ||
LRR_8 | 322..382 | CDD:290566 | 17/76 (22%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/39 (15%) | ||
LRR_8 | 370..428 | CDD:290566 | 15/65 (23%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 5/30 (17%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 418..478 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 476..526 | CDD:214507 | 13/67 (19%) | ||
swi2 | NP_611247.3 | LRR | <117..384 | CDD:227223 | 59/298 (20%) |
leucine-rich repeat | 132..154 | CDD:275378 | 3/21 (14%) | ||
leucine-rich repeat | 155..178 | CDD:275378 | 5/31 (16%) | ||
leucine-rich repeat | 179..201 | CDD:275378 | 10/22 (45%) | ||
leucine-rich repeat | 202..214 | CDD:275378 | 5/12 (42%) | ||
leucine-rich repeat | 287..307 | CDD:275378 | 2/19 (11%) | ||
leucine-rich repeat | 308..332 | CDD:275378 | 2/23 (9%) | ||
leucine-rich repeat | 333..357 | CDD:275378 | 5/23 (22%) | ||
leucine-rich repeat | 358..385 | CDD:275378 | 6/39 (15%) | ||
leucine-rich repeat | 386..398 | CDD:275378 | 3/11 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |