Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038939951.1 | Gene: | Lrg1 / 367455 | RGDID: | 1359464 | Length: | 342 | Species: | Rattus norvegicus |
Alignment Length: | 385 | Identity: | 96/385 - (24%) |
---|---|---|---|
Similarity: | 149/385 - (38%) | Gaps: | 105/385 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 PYSISLLDCSLRNVTFLSDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQ-ALGLPGNAL- 235
Fly 236 MSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVL 300
Fly 301 KLGGNRLGDYAQSLRSLSQCL-----SLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKS 360
Fly 361 IQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDL 425
Fly 426 THNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLS----------- 479
Fly 480 ------------------CDCSIRPFAEWLQESQLHSSLSAS---CVTPPRLEGAPLLQV 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 40/167 (24%) |
leucine-rich repeat | 179..199 | CDD:275378 | 5/19 (26%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 249..307 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 2/22 (9%) | ||
LRR_RI | <270..479 | CDD:238064 | 62/213 (29%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 10/29 (34%) | ||
LRR_8 | 322..382 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 370..428 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 418..478 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 476..526 | CDD:214507 | 15/75 (20%) | ||
Lrg1 | XP_038939951.1 | PRK15370 | <55..>293 | CDD:185268 | 73/285 (26%) |
leucine-rich repeat | 65..86 | CDD:275380 | 7/36 (19%) | ||
leucine-rich repeat | 87..110 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 111..134 | CDD:275380 | 10/29 (34%) | ||
leucine-rich repeat | 135..158 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 183..206 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 255..278 | CDD:275380 | 5/22 (23%) | ||
PCC | 259..>339 | CDD:188093 | 15/79 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |