Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001029182.1 | Gene: | Tril / 362364 | RGDID: | 1310827 | Length: | 811 | Species: | Rattus norvegicus |
Alignment Length: | 469 | Identity: | 131/469 - (27%) |
---|---|---|---|
Similarity: | 184/469 - (39%) | Gaps: | 83/469 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 132 CPNITGTRNAELECGCDLPHTLRCNIDLHGMMLLADR-LRTSPYSISL------LDCSLRNVTFL 189
Fly 190 SDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDL 254
Fly 255 ANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDY--------- 310
Fly 311 --------AQSLRSL-----SQCLSLRQLDLQANNLNGPLSE-QTLPGMRNLESLNLNRNLIKSI 361
Fly 362 QNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLT 426
Fly 427 HNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWL 491
Fly 492 QESQLHS-----SLSASCVTPPRLEGAPLLQVPVETL---SCDMDNVEKDNANIMQHLETLAKPN 548
Fly 549 QTSPIKDLSEEIIL 562 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 57/211 (27%) |
leucine-rich repeat | 179..199 | CDD:275378 | 6/19 (32%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 249..307 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | <270..479 | CDD:238064 | 70/231 (30%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 11/46 (24%) | ||
LRR_8 | 322..382 | CDD:290566 | 20/60 (33%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 9/24 (38%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 418..478 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 476..526 | CDD:214507 | 16/57 (28%) | ||
Tril | NP_001029182.1 | LRR_RI | 22..313 | CDD:238064 | 94/327 (29%) |
leucine-rich repeat | 37..57 | CDD:275378 | 8/29 (28%) | ||
LRR 1 | 61..81 | 6/23 (26%) | |||
LRR_8 | 84..143 | CDD:290566 | 19/58 (33%) | ||
LRR 2 | 84..105 | 5/20 (25%) | |||
leucine-rich repeat | 85..108 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 108..129 | 8/20 (40%) | |||
leucine-rich repeat | 109..132 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 132..153 | 6/20 (30%) | |||
leucine-rich repeat | 133..156 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 156..215 | CDD:290566 | 17/58 (29%) | ||
LRR 5 | 156..177 | 7/20 (35%) | |||
leucine-rich repeat | 157..180 | CDD:275380 | 7/22 (32%) | ||
LRR 6 | 180..201 | 3/20 (15%) | |||
leucine-rich repeat | 181..204 | CDD:275380 | 4/22 (18%) | ||
LRR 7 | 204..223 | 8/18 (44%) | |||
leucine-rich repeat | 205..230 | CDD:275380 | 9/24 (38%) | ||
LRR_8 | 229..289 | CDD:290566 | 22/59 (37%) | ||
LRR 8 | 230..251 | 4/20 (20%) | |||
leucine-rich repeat | 231..254 | CDD:275380 | 4/22 (18%) | ||
LRR 9 | 254..275 | 10/20 (50%) | |||
leucine-rich repeat | 255..278 | CDD:275380 | 11/22 (50%) | ||
LRR 10 | 278..298 | 5/19 (26%) | |||
leucine-rich repeat | 279..302 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 302..359 | CDD:290566 | 17/56 (30%) | ||
LRR 11 | 302..323 | 8/20 (40%) | |||
leucine-rich repeat | 303..323 | CDD:275380 | 8/19 (42%) | ||
LRR 12 | 326..347 | 7/20 (35%) | |||
leucine-rich repeat | 327..340 | CDD:275378 | 7/12 (58%) | ||
leucine-rich repeat | 351..363 | CDD:275378 | 3/11 (27%) | ||
TPKR_C2 | 359..406 | CDD:301599 | 14/48 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 414..460 | 9/38 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 486..562 | ||||
FN3 | 589..661 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.870 |