| Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_955793.1 | Gene: | Lgi4 / 361549 | RGDID: | 735035 | Length: | 537 | Species: | Rattus norvegicus |
| Alignment Length: | 361 | Identity: | 79/361 - (21%) |
|---|---|---|---|
| Similarity: | 125/361 - (34%) | Gaps: | 95/361 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 348 LESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSA 412
Fly 413 SLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENP 477
Fly 478 LSCDCSIRPFAEWLQESQLHSSL-SASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHL 541
Fly 542 ETLAKPNQTSPIKDLSEEIILHELHFSTDYG--LILTWLLNLSKKDYMCDAIFVYKEEHINEILI 604
Fly 605 DNSPIHCESKVVNGQ------------------------NTVSVIVP-------DSSSLEI-GES 637
Fly 638 YRFCLVMIQEQKPDSELNIGCSNITRLERSSPGAVP 673 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | |
| leucine-rich repeat | 179..199 | CDD:275378 | |||
| leucine-rich repeat | 200..223 | CDD:275380 | |||
| leucine-rich repeat | 225..248 | CDD:275380 | |||
| LRR_8 | 249..307 | CDD:290566 | |||
| leucine-rich repeat | 249..272 | CDD:275380 | |||
| LRR_RI | <270..479 | CDD:238064 | 36/130 (28%) | ||
| leucine-rich repeat | 273..296 | CDD:275380 | |||
| leucine-rich repeat | 297..322 | CDD:275380 | |||
| LRR_8 | 322..382 | CDD:290566 | 8/33 (24%) | ||
| leucine-rich repeat | 323..347 | CDD:275380 | |||
| leucine-rich repeat | 348..371 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 370..428 | CDD:290566 | 20/57 (35%) | ||
| leucine-rich repeat | 372..395 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 396..419 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 418..478 | CDD:290566 | 14/59 (24%) | ||
| leucine-rich repeat | 420..443 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 444..467 | CDD:275380 | 3/22 (14%) | ||
| LRRCT | 476..526 | CDD:214507 | 11/50 (22%) | ||
| Lgi4 | NP_955793.1 | leucine-rich repeat | 54..77 | CDD:275378 | 5/22 (23%) |
| LRR_8 | 76..136 | CDD:290566 | 21/59 (36%) | ||
| leucine-rich repeat | 78..101 | CDD:275378 | 8/22 (36%) | ||
| LRR_4 | 102..140 | CDD:289563 | 15/37 (41%) | ||
| leucine-rich repeat | 102..125 | CDD:275378 | 8/22 (36%) | ||
| leucine-rich repeat | 126..149 | CDD:275378 | 10/22 (45%) | ||
| leucine-rich repeat | 150..162 | CDD:275378 | 5/35 (14%) | ||
| LRRCT | 158..207 | CDD:214507 | 12/58 (21%) | ||
| EPTP | <220..251 | CDD:281697 | 6/30 (20%) | ||
| EPTP | 351..392 | CDD:281697 | 2/4 (50%) | ||
| EPTP | 396..438 | CDD:281697 | |||
| EPTP | 441..482 | CDD:281697 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||