Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
Alignment Length: | 718 | Identity: | 156/718 - (21%) |
---|---|---|---|
Similarity: | 249/718 - (34%) | Gaps: | 221/718 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 KCPNITGTRNAELECGCDLPHTLRCNIDLHGMMLLADRLRT--SPYSISLLDCSL------RNVT 187
Fly 188 FLSDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERL 252
Fly 253 DLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSL-RS 316
Fly 317 LSQCLSLRQLDLQANNLNGPLSEQTLPGMRN----LESLNLNRNLIKSIQNKALANFSRLVSLSL 377
Fly 378 RHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFL--------RALT 434
Fly 435 S--------------------------------------------------------DLIAPLPS 443
Fly 444 LRELRLAGNDISIVARNAMDGARELE------------------------SLQMQENPLSCD-CS 483
Fly 484 IRPFAEWLQESQLHSSLSASCVTPPRLEGAPLLQVPVETL-SC------DMDNVEKDNANIMQH- 540
Fly 541 -LETLAKPNQTSPIKDLSEEIILHELHFSTDYGLILTWLLNLSKKDYMCDAIFVYKEEHIN---- 600
Fly 601 -------------------------EILIDNSPIHCESKVVNGQ---------NTVSVIVPDSSS 631
Fly 632 LEIGESY----RFCLVMIQEQKPDSELNIGCSNITRLERSSPGAVPVSRQYQRRPYYNANELKPE 692
Fly 693 VVH 695 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 46/191 (24%) |
leucine-rich repeat | 179..199 | CDD:275378 | 4/25 (16%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 249..307 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <270..479 | CDD:238064 | 72/301 (24%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 8/25 (32%) | ||
LRR_8 | 322..382 | CDD:290566 | 16/63 (25%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 22/57 (39%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 418..478 | CDD:290566 | 23/147 (16%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 11/86 (13%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 476..526 | CDD:214507 | 14/57 (25%) | ||
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 5/23 (22%) |
leucine-rich repeat | 108..131 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 131..190 | CDD:290566 | 23/58 (40%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 151..422 | CDD:238064 | 70/278 (25%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 178..262 | CDD:290566 | 24/91 (26%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 204..251 | CDD:275380 | 12/54 (22%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 274..334 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 9/22 (41%) | ||
LRR_4 | 298..342 | CDD:289563 | 9/43 (21%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 7/22 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24366 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |