Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285960.1 | Gene: | CG18480 / 34920 | FlyBaseID: | FBgn0028518 | Length: | 550 | Species: | Drosophila melanogaster |
Alignment Length: | 517 | Identity: | 125/517 - (24%) |
---|---|---|---|
Similarity: | 184/517 - (35%) | Gaps: | 138/517 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 312 QSLRSLSQ----CLSLRQLDLQANNLNGPLSEQTLPGMR-----NLESLNLNRNLIKSIQNKALA 367
Fly 368 NFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAI------SSASLQHLS-------- 418
Fly 419 ----------RLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQM 473
Fly 474 QENPLSCDCSIRPFAEWL--------------QESQLHSSLSASCVTPPR----------LEGAP 514
Fly 515 LLQVPVETLSC--DMDNVEKDNANIMQHLETLAKPNQTSPIKDLSE--------------EIILH 563
Fly 564 EL---------------HFSTDYGLILTWLLNLSKKDYMCDAIFVYKEEHINEILIDNSPIHCES 613
Fly 614 KVVNGQNTVSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITRLERSSPGAVPVSRQY 678
Fly 679 QRRPYYNANELKPEVVHDAGEDYQVNQRRFNSVVGSQPQQT-QQSTLLHSYTVIDSLNKSFL 739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 8/25 (32%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 58/199 (29%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | 5/13 (38%) | ||
LRR_8 | 322..382 | CDD:290566 | 16/64 (25%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 5/28 (18%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 25/81 (31%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 12/46 (26%) | ||
LRR_8 | 418..478 | CDD:290566 | 19/77 (25%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 18/75 (24%) | ||
CG18480 | NP_001285960.1 | LRR_8 | 74..134 | CDD:290566 | 23/59 (39%) |
LRR_RI | <76..230 | CDD:238064 | 47/153 (31%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 122..182 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 170..230 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 6/22 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |