Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001137140.1 | Gene: | AMIGO2 / 347902 | HGNCID: | 24073 | Length: | 522 | Species: | Homo sapiens |
Alignment Length: | 518 | Identity: | 99/518 - (19%) |
---|---|---|---|
Similarity: | 153/518 - (29%) | Gaps: | 243/518 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 235 LMSVPWNALSTLSALERLDLANNKIKALGT----ADFVGLTSLVYLELSNNQISSISQRTFVNLR 295
Fly 296 KLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKS 360
Fly 361 IQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISS---ASLQHLSRLTV 422
Fly 423 LDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPF 487
Fly 488 AEWLQESQLHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHLETLAKPNQTSP 552
Fly 553 IKDLSEEIILHELHFST--DYGLILTWLLNLSKKDYMC-----------------------DAI- 591
Fly 592 --------FVYKEEHINEILIDNSPIHCESKVVNGQNTVSVIVPDSSSLE--------------- 633
Fly 634 -IGESYRF-------CLVMIQEQ--KPDSELNIGCSNITRLERSSPGAVPVSRQYQRRPYYNA 686 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 21/102 (21%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | 4/12 (33%) | ||
LRR_8 | 249..307 | CDD:290566 | 17/61 (28%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 9/26 (35%) | ||
LRR_RI | <270..479 | CDD:238064 | 43/211 (20%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 0/24 (0%) | ||
LRR_8 | 322..382 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 2/23 (9%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 19/60 (32%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/25 (24%) | ||
LRR_8 | 418..478 | CDD:290566 | 8/59 (14%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 0/22 (0%) | ||
LRRCT | 476..526 | CDD:214507 | 9/49 (18%) | ||
AMIGO2 | NP_001137140.1 | leucine-rich repeat | 51..72 | CDD:275380 | 4/15 (27%) |
LRR | <54..>240 | CDD:227223 | 61/271 (23%) | ||
LRR 1 | 69..90 | 7/20 (35%) | |||
leucine-rich repeat | 73..95 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 94..175 | CDD:338972 | 32/134 (24%) | ||
LRR 2 | 94..115 | 9/71 (13%) | |||
leucine-rich repeat | 97..118 | CDD:275380 | 10/74 (14%) | ||
LRR 3 | 118..139 | 7/20 (35%) | |||
leucine-rich repeat | 119..142 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 142..163 | 8/20 (40%) | |||
leucine-rich repeat | 143..166 | CDD:275380 | 10/22 (45%) | ||
LRR 5 | 166..187 | 5/20 (25%) | |||
leucine-rich repeat | 167..193 | CDD:275380 | 6/25 (24%) | ||
LRR 6 | 193..214 | 5/20 (25%) | |||
leucine-rich repeat | 194..219 | CDD:275380 | 6/46 (13%) | ||
TPKR_C2 | 228..283 | CDD:387596 | 17/136 (13%) | ||
IG_like | 298..380 | CDD:214653 | 18/86 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 501..522 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |