Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001271152.1 | Gene: | LRIT2 / 340745 | HGNCID: | 23443 | Length: | 560 | Species: | Homo sapiens |
Alignment Length: | 501 | Identity: | 106/501 - (21%) |
---|---|---|---|
Similarity: | 172/501 - (34%) | Gaps: | 179/501 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 270 LTSLVYLE-------------LSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCL 321
Fly 322 SLRQLDLQANNLNGPLSEQ---TLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQID 383
Fly 384 VLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELR 448
Fly 449 LAGNDISIVARNAMDGARELESL--QMQENPLSCDCSIRPFAEWLQESQL--------------- 496
Fly 497 -------HSSLSASCVTP----------------------------PRLEGA-PL---------- 515
Fly 516 ---------------------LQVPVETL------SCDMDN-VEKDNANIMQHL---------ET 543
Fly 544 LAKPNQTSPIKDLSEEIILHELHFSTDYGLILTWL--LNLSKKDYMCDAIFVYKEEHINEILIDN 606
Fly 607 SPIHCESKVVNGQNTVSV--IVPDSSSLEIGESYRFCLVMIQEQKP 650 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 15/76 (20%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 12/49 (24%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 1/1 (100%) | ||
LRR_RI | <270..479 | CDD:238064 | 62/226 (27%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 8/35 (23%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 4/24 (17%) | ||
LRR_8 | 322..382 | CDD:290566 | 20/62 (32%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 370..428 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 418..478 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 3/22 (14%) | ||
LRRCT | 476..526 | CDD:214507 | 16/137 (12%) | ||
LRIT2 | NP_001271152.1 | leucine-rich repeat | 37..55 | CDD:275380 | 8/33 (24%) |
leucine-rich repeat | 58..80 | CDD:275378 | 6/25 (24%) | ||
LRR_8 | 60..115 | CDD:290566 | 19/58 (33%) | ||
LRR_RI | <75..164 | CDD:238064 | 33/88 (38%) | ||
LRR 1 | 80..103 | 10/22 (45%) | |||
LRR_4 | 81..119 | CDD:289563 | 14/37 (38%) | ||
leucine-rich repeat | 81..104 | CDD:275378 | 10/22 (45%) | ||
LRR_8 | 103..163 | CDD:290566 | 22/59 (37%) | ||
LRR 2 | 104..125 | 6/20 (30%) | |||
leucine-rich repeat | 105..128 | CDD:275378 | 6/22 (27%) | ||
LRR 3 | 128..149 | 8/20 (40%) | |||
leucine-rich repeat | 129..152 | CDD:275378 | 10/22 (45%) | ||
LRR 4 | 152..173 | 7/20 (35%) | |||
leucine-rich repeat | 153..164 | CDD:275378 | 6/10 (60%) | ||
leucine-rich repeat | 193..204 | CDD:275378 | 3/10 (30%) | ||
TPKR_C2 | 200..243 | CDD:301599 | 7/42 (17%) | ||
I-set | 253..354 | CDD:254352 | 12/100 (12%) | ||
IGc2 | 267..344 | CDD:197706 | 8/76 (11%) | ||
FN3 | 377..440 | CDD:214495 | 17/87 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 518..560 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |