Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
Alignment Length: | 395 | Identity: | 126/395 - (31%) |
---|---|---|---|
Similarity: | 175/395 - (44%) | Gaps: | 49/395 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 142 ELECGCDLPHTLRCNIDLHGMM-LLADRLRTSPYSISLLDCSLRNVTFLSDAKIFDNVSLHGLVI 205
Fly 206 SSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGL 270
Fly 271 TSLVYLELSNNQISSISQRTFVNL-RKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN--- 331
Fly 332 NLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSR-LVSLSLRHNQIDVLQDHAFFGLGA 395
Fly 396 LDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARN 460
Fly 461 AMDGAR-ELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSAS----CVTPPRLEGAPLLQVPV 520
Fly 521 ETLSC 525 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 60/187 (32%) |
leucine-rich repeat | 179..199 | CDD:275378 | 6/19 (32%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 249..307 | CDD:290566 | 20/58 (34%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | <270..479 | CDD:238064 | 65/214 (30%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 322..382 | CDD:290566 | 27/63 (43%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 8/26 (31%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 12/22 (55%) | ||
LRR_8 | 370..428 | CDD:290566 | 16/58 (28%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 418..478 | CDD:290566 | 17/60 (28%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/23 (30%) | ||
LRRCT | 476..526 | CDD:214507 | 18/54 (33%) | ||
haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 67/208 (32%) |
leucine-rich repeat | 86..105 | CDD:275380 | 6/19 (32%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 131..189 | CDD:338972 | 24/57 (42%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 203..225 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 226..253 | CDD:275380 | 8/26 (31%) | ||
LRR_8 | 254..337 | CDD:338972 | 36/106 (34%) | ||
leucine-rich repeat | 254..302 | CDD:275380 | 24/71 (34%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 7/22 (32%) | ||
PCC | 332..>413 | CDD:188093 | 24/80 (30%) | ||
PRK10927 | <1061..>1097 | CDD:236797 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24366 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |