Protein Alignment Lrt and Rtn4rl2

DIOPT Version :9

• Sequence 1: NP_001286640.1
• Gene: Lrt / 37342
• FlyBaseID: FBgn0034540
• Length: 830
• Species: Drosophila melanogaster
• Sequence 2: NP_852045.1
• Gene: Rtn4rl2 / 311169
• RGDID: 727797
• Length: 420
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lrt	NP_001286640.1	LRR_RI	<151..334	CDD:238064
		leucine-rich repeat	179..199	CDD:275378
		leucine-rich repeat	200..223	CDD:275380
		leucine-rich repeat	225..248	CDD:275380
		LRR_8	249..307	CDD:290566
		leucine-rich repeat	249..272	CDD:275380
		LRR_RI	<270..479	CDD:238064
		leucine-rich repeat	273..296	CDD:275380
		leucine-rich repeat	297..322	CDD:275380
		LRR_8	322..382	CDD:290566
		leucine-rich repeat	323..347	CDD:275380
		leucine-rich repeat	348..371	CDD:275380
		LRR_8	370..428	CDD:290566
		leucine-rich repeat	372..395	CDD:275380
		leucine-rich repeat	396..419	CDD:275380
		LRR_8	418..478	CDD:290566
		leucine-rich repeat	420..443	CDD:275380
		leucine-rich repeat	444..467	CDD:275380
		LRRCT	476..526	CDD:214507
Rtn4rl2	NP_852045.1	LRR_8	60..117	CDD:290566
		LRR 1	61..82
		leucine-rich repeat	62..83	CDD:275380
		LRR 2	83..104
		leucine-rich repeat	84..107	CDD:275380
		LRR_RI	103..>261	CDD:238064
		LRR 3	107..129
		LRR_8	108..167	CDD:290566
		leucine-rich repeat	108..132	CDD:275380
		LRR 4	132..153
		leucine-rich repeat	133..156	CDD:275380
		LRR_8	156..215	CDD:290566
		LRR 5	156..177
		leucine-rich repeat	157..180	CDD:275380
		LRR 6	180..201
		leucine-rich repeat	181..204	CDD:275380
		LRR_8	204..262	CDD:290566
		LRR 7	204..225
		leucine-rich repeat	205..228	CDD:275380
		LRR 8	228..249
		leucine-rich repeat	229..252	CDD:275380
		TPKR_C2	261..311	CDD:301599
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	286..390
		Important for interaction with MAG. /evidence=ECO:0000269|PubMed:19420245	315..327

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910