Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006499655.1 | Gene: | Rtn4rl2 / 269295 | MGIID: | 2669796 | Length: | 480 | Species: | Mus musculus |
Alignment Length: | 288 | Identity: | 97/288 - (33%) |
---|---|---|---|
Similarity: | 143/288 - (49%) | Gaps: | 42/288 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 233 NALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKL 297
Fly 298 EVLKLGGNRLGDYAQSL-----RSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNL 357
Fly 358 IKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTV 422
Fly 423 LDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPF 487
Fly 488 AEWLQESQLHSSLSASCVTPPRLEGAPL 515 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 36/105 (34%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | 6/14 (43%) | ||
LRR_8 | 249..307 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <270..479 | CDD:238064 | 68/213 (32%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 10/29 (34%) | ||
LRR_8 | 322..382 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 418..478 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 17/40 (43%) | ||
Rtn4rl2 | XP_006499655.1 | leucine-rich repeat | 122..143 | CDD:275380 | 8/22 (36%) |
LRR_8 | 143..203 | CDD:338972 | 21/62 (34%) | ||
leucine-rich repeat | 144..167 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 168..192 | CDD:275380 | 10/26 (38%) | ||
leucine-rich repeat | 193..216 | CDD:275380 | 6/26 (23%) | ||
LRR_8 | 216..275 | CDD:338972 | 21/58 (36%) | ||
leucine-rich repeat | 217..240 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 241..264 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 264..322 | CDD:338972 | 25/81 (31%) | ||
leucine-rich repeat | 265..288 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 289..312 | CDD:275380 | 9/22 (41%) | ||
LRRCT | 321..371 | CDD:214507 | 17/40 (43%) | ||
PHA03247 | 349..>429 | CDD:223021 | 5/11 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4913 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |