| Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001005210.2 | Gene: | LRRC55 / 219527 | HGNCID: | 32324 | Length: | 298 | Species: | Homo sapiens |
| Alignment Length: | 193 | Identity: | 59/193 - (30%) |
|---|---|---|---|
| Similarity: | 90/193 - (46%) | Gaps: | 21/193 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 350 SLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASL 414
Fly 415 QHLSRLTVLDLTHN-FLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPL 478
Fly 479 SCDCSIRPFAEWLQ--------ESQLHSSLSASCVTPPRLEGAPLLQVPVE-------TLSCD 526 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lrt | NP_001286640.1 | LRR | 175..582 | CDD:443914 | 59/193 (31%) |
| leucine-rich repeat | 179..199 | CDD:275378 | |||
| leucine-rich repeat | 200..223 | CDD:275380 | |||
| leucine-rich repeat | 225..248 | CDD:275380 | |||
| leucine-rich repeat | 249..272 | CDD:275380 | |||
| leucine-rich repeat | 273..296 | CDD:275380 | |||
| leucine-rich repeat | 297..322 | CDD:275380 | |||
| leucine-rich repeat | 323..347 | CDD:275380 | |||
| leucine-rich repeat | 348..371 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 396..419 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 420..443 | CDD:275380 | 8/23 (35%) | ||
| leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
| LRRC55 | NP_001005210.2 | LRR | <47..>196 | CDD:443914 | 36/126 (29%) |
| leucine-rich repeat | 47..66 | CDD:275380 | |||
| LRR 1 | 66..87 | 5/17 (29%) | |||
| leucine-rich repeat | 67..90 | CDD:275380 | 5/20 (25%) | ||
| LRR 2 | 90..111 | 6/20 (30%) | |||
| leucine-rich repeat | 91..114 | CDD:275380 | 6/22 (27%) | ||
| LRR 3 | 114..135 | 7/20 (35%) | |||
| leucine-rich repeat | 115..138 | CDD:275380 | 8/22 (36%) | ||
| LRR 4 | 138..160 | 7/21 (33%) | |||
| leucine-rich repeat | 139..163 | CDD:275380 | 8/23 (35%) | ||
| LRR 5 | 163..186 | 6/22 (27%) | |||
| leucine-rich repeat | 164..187 | CDD:275380 | 6/22 (27%) | ||
| LRRCT | 196..247 | CDD:214507 | 20/55 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||