Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491676.2 | Gene: | lron-8 / 181983 | WormBaseID: | WBGene00020693 | Length: | 341 | Species: | Caenorhabditis elegans |
Alignment Length: | 297 | Identity: | 74/297 - (24%) |
---|---|---|---|
Similarity: | 125/297 - (42%) | Gaps: | 63/297 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 251 RLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLG----DYA 311
Fly 312 QSLRSLSQCLSLRQLDLQANN-LNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSL 375
Fly 376 SLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAP 440
Fly 441 LPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDC-SIRPFAEWLQESQLHSSLSASC 504
Fly 505 VTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHL 541 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 23/87 (26%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 17/55 (31%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 5/20 (25%) | ||
LRR_RI | <270..479 | CDD:238064 | 55/213 (26%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 7/28 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 370..428 | CDD:290566 | 12/57 (21%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 418..478 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 8/22 (36%) | ||
LRRCT | 476..526 | CDD:214507 | 13/50 (26%) | ||
lron-8 | NP_491676.2 | LRR | <71..>237 | CDD:227223 | 54/213 (25%) |
leucine-rich repeat | 75..98 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 99..122 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 123..158 | CDD:275380 | 12/57 (21%) | ||
leucine-rich repeat | 159..179 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 180..202 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 203..226 | CDD:275380 | 8/22 (36%) | ||
LRRCT | 235..282 | CDD:214507 | 13/50 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |