Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491035.1 | Gene: | lron-11 / 171837 | WormBaseID: | WBGene00022129 | Length: | 542 | Species: | Caenorhabditis elegans |
Alignment Length: | 419 | Identity: | 111/419 - (26%) |
---|---|---|---|
Similarity: | 180/419 - (42%) | Gaps: | 50/419 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 135 ITGTRNAELECGCDLPHTLRC-NIDLHGMMLLADRLRTSPYSISLLDCSLRNVTFLSDAKIFDNV 198
Fly 199 SLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALG 263
Fly 264 TADFVGLTSLVYLELSNNQIS------------------------SISQRTFVNLRKLEVLKLGG 304
Fly 305 NRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANF 369
Fly 370 SRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYN-GIVAISSASLQHLSRLTVLDLTHNFLRAL 433
Fly 434 TSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHS 498
Fly 499 SLSASCVTPPRLEGAPLLQVPVETLSCDM 527 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 53/207 (26%) |
leucine-rich repeat | 179..199 | CDD:275378 | 5/19 (26%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 249..307 | CDD:290566 | 21/81 (26%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <270..479 | CDD:238064 | 62/233 (27%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/46 (15%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 322..382 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 418..478 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 15/49 (31%) | ||
lron-11 | NP_491035.1 | leucine-rich repeat | 48..71 | CDD:275380 | 6/28 (21%) |
LRR_RI | <50..177 | CDD:238064 | 30/128 (23%) | ||
LRR_8 | 70..130 | CDD:290566 | 16/60 (27%) | ||
leucine-rich repeat | 72..95 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 96..119 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 118..177 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 120..142 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <141..270 | CDD:238064 | 35/132 (27%) | ||
leucine-rich repeat | 143..166 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 167..190 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 190..249 | CDD:290566 | 25/61 (41%) | ||
leucine-rich repeat | 191..214 | CDD:275380 | 10/24 (42%) | ||
leucine-rich repeat | 215..238 | CDD:275380 | 9/23 (39%) | ||
LRR_8 | 238..295 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 239..261 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 262..283 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 284..345 | CDD:290566 | 17/60 (28%) | ||
leucine-rich repeat | 286..310 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 311..334 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 6/22 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |