Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_689824.2 | Gene: | LRRN4 / 164312 | HGNCID: | 16208 | Length: | 740 | Species: | Homo sapiens |
Alignment Length: | 481 | Identity: | 120/481 - (24%) |
---|---|---|---|
Similarity: | 174/481 - (36%) | Gaps: | 137/481 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 318 SQCLSLRQLDLQANNLNGPLSEQTLPGM--RNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 380
Fly 381 QIDVLQDHAFFGLG---ALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLP 442
Fly 443 SLRELRLAGNDISIVARNAMDGARE-------------LESLQMQENPLSCDCSIRPFAEWLQES 494
Fly 495 QLHSSLSASCVTPPR---LEGAPLLQVP-VETLSC-DMDNVEKDNANIMQ---HLETLAKPN--- 548
Fly 549 --------QTSPIKDLSEEIILHELHFSTDYGLILTWLLNLSKK-------DYMCDAIFVYKEEH 598
Fly 599 INEILIDNSPIHCESKVVNGQNTVSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITR 663
Fly 664 LERS--------SPGAVPVSR------QYQRRPYYNANELKPEVVHDAGEDYQVNQRRFNSVVGS 714
Fly 715 QPQQTQQSTLLHSYTVIDSLNKSFLP 740 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 5/15 (33%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 57/178 (32%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | 2/3 (67%) | ||
LRR_8 | 322..382 | CDD:290566 | 21/61 (34%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/60 (38%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 10/25 (40%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 418..478 | CDD:290566 | 21/72 (29%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 13/54 (24%) | ||
LRRN4 | NP_689824.2 | LRR 1 | 51..74 | 8/23 (35%) | |
LRR_RI | <69..213 | CDD:238064 | 50/150 (33%) | ||
LRR_8 | 75..134 | CDD:290566 | 24/62 (39%) | ||
LRR 2 | 75..97 | 7/21 (33%) | |||
leucine-rich repeat | 77..100 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 98..123 | 10/28 (36%) | |||
LRR_8 | 123..178 | CDD:290566 | 22/54 (41%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 125..144 | 7/18 (39%) | |||
LRR 5 | 145..168 | 10/22 (45%) | |||
leucine-rich repeat | 148..171 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 170..236 | CDD:290566 | 16/73 (22%) | ||
leucine-rich repeat | 172..205 | CDD:275380 | 7/35 (20%) | ||
LRR 6 | 174..197 | 6/25 (24%) | |||
LRR 7 | 203..226 | 6/27 (22%) | |||
leucine-rich repeat | 206..229 | CDD:275380 | 6/27 (22%) | ||
LRR | <224..>311 | CDD:227223 | 20/90 (22%) | ||
LRR 8 | 228..251 | 7/24 (29%) | |||
leucine-rich repeat | 230..254 | CDD:275380 | 7/25 (28%) | ||
LRR 9 | 253..276 | 5/22 (23%) | |||
leucine-rich repeat | 255..279 | CDD:275380 | 5/23 (22%) | ||
LRR 10 | 277..300 | 4/22 (18%) | |||
leucine-rich repeat | 280..303 | CDD:275380 | 4/22 (18%) | ||
PHA03255 | 313..>491 | CDD:165513 | 40/197 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 389..517 | 17/80 (21%) | |||
FN3 | 580..676 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |