Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005163128.1 | Gene: | lrrn3a / 101887059 | ZFINID: | ZDB-GENE-061220-7 | Length: | 691 | Species: | Danio rerio |
Alignment Length: | 657 | Identity: | 148/657 - (22%) |
---|---|---|---|
Similarity: | 240/657 - (36%) | Gaps: | 169/657 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 145 CGCDL------------PHTLRCNIDLHGMMLLADRLRT----------------SP--YSISL- 178
Fly 179 -LDCSLRNVTFLSDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNA 242
Fly 243 LSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRL 307
Fly 308 GDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRL 372
Fly 373 VSLSLRHNQIDVLQDHAFFGLGALDSLDL-SYNGIVAISSASLQHLSRLTVLDLTHN-FLRALTS 435
Fly 436 DLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQES------ 494
Fly 495 -QLHSSLSASCVTPPRLEGAPLLQV----------PVETLSCDMDNVEKDNANIMQ-HLETLAKP 547
Fly 548 NQTSPIKDLSEEIILHEL-----HFSTDYGLILTWLLNLSKKDYMCDA----------------- 590
Fly 591 ---IFVYKEEHI-------NEILID----------------NSPIHC---ESKVVNG-------- 618
Fly 619 -----QNTVSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELN----------------IGCSNIT 662
Fly 663 RLERSSP 669 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 55/202 (27%) |
leucine-rich repeat | 179..199 | CDD:275378 | 7/19 (37%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 249..307 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <270..479 | CDD:238064 | 58/210 (28%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 418..478 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 4/22 (18%) | ||
LRRCT | 476..526 | CDD:214507 | 17/66 (26%) | ||
lrrn3a | XP_005163128.1 | LRR_RI | 29..>272 | CDD:238064 | 70/268 (26%) |
leucine-rich repeat | 52..70 | CDD:275380 | 9/19 (47%) | ||
leucine-rich repeat | 71..93 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 94..117 | CDD:275380 | 10/35 (29%) | ||
leucine-rich repeat | 118..141 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 140..200 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 142..165 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 166..189 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 190..213 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 213..272 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 214..237 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 286..310 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 309..370 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 311..333 | CDD:275380 | 5/21 (24%) | ||
leucine-rich repeat | 336..359 | CDD:275378 | 4/22 (18%) | ||
leucine-rich repeat | 360..372 | CDD:275378 | 3/11 (27%) | ||
LRRCT | 368..412 | CDD:214507 | 16/50 (32%) | ||
IG_like | 429..513 | CDD:214653 | 13/83 (16%) | ||
Ig | 437..513 | CDD:299845 | 11/75 (15%) | ||
FN3 | 526..>591 | CDD:238020 | 12/64 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |