Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933436.2 | Gene: | tril / 100498304 | XenbaseID: | XB-GENE-6050227 | Length: | 872 | Species: | Xenopus tropicalis |
Alignment Length: | 702 | Identity: | 172/702 - (24%) |
---|---|---|---|
Similarity: | 252/702 - (35%) | Gaps: | 196/702 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 136 TGTRNAELEC--GCDLPHTLRCNIDLHGMMLLADR-LRTSPYSISLLDCSLRNVTFLSDAKIFDN 197
Fly 198 VS---------LHGLVISSGEIKRVHKSAF---------------LGIRGP--------LQALGL 230
Fly 231 PGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLR 295
Fly 296 KLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLD--LQANNLNGPLSEQTLPGMRNLESLNLNRNLI 358
Fly 359 KSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVL 423
Fly 424 DLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFA 488
Fly 489 EWLQESQLHS-----SLSASCVTPPRLEG-----------------------APLLQVPVETLS- 524
Fly 525 ----------CDMDNV---EKDNANIMQHLE--TLAKPNQTSPIKDLSEEIILHELHFSTDYGLI 574
Fly 575 LTWLLNLSK-----------------KDYMCDAIFVYKEEHINEILIDNSPIH-CESKVVNGQNT 621
Fly 622 VSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITRLERSSPGAVPVSRQYQRRPYYNA 686
Fly 687 NELK---PEVVHDAGEDYQVNQRRFNSVVGSQPQQTQQSTLLHSYTVIDSLN 735 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 61/217 (28%) |
leucine-rich repeat | 179..199 | CDD:275378 | 5/19 (26%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 7/37 (19%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 249..307 | CDD:290566 | 25/57 (44%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <270..479 | CDD:238064 | 67/210 (32%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 322..382 | CDD:290566 | 19/61 (31%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 370..428 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 418..478 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 4/22 (18%) | ||
LRRCT | 476..526 | CDD:214507 | 17/88 (19%) | ||
tril | XP_002933436.2 | leucine-rich repeat | 35..58 | CDD:275378 | 6/30 (20%) |
leucine-rich repeat | 59..82 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 83..106 | CDD:275380 | 6/22 (27%) | ||
internalin_A | 84..>375 | CDD:380193 | 94/320 (29%) | ||
leucine-rich repeat | 107..130 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 203..226 | CDD:275380 | 9/27 (33%) | ||
leucine-rich repeat | 227..250 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 251..274 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 275..298 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 299..320 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 323..346 | CDD:275380 | 11/22 (50%) | ||
fn3 | 662..737 | CDD:394996 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |