Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009289666.1 | Gene: | igsf10 / 100329456 | ZFINID: | ZDB-GENE-130530-827 | Length: | 2497 | Species: | Danio rerio |
Alignment Length: | 688 | Identity: | 131/688 - (19%) |
---|---|---|---|
Similarity: | 242/688 - (35%) | Gaps: | 200/688 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 310 YAQS-----LRSLSQC-----LSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNK 364
Fly 365 ALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNF 429
Fly 430 LRALTSDL--------IAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRP 486
Fly 487 FAEWLQ----------ESQLHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHL 541
Fly 542 ETLAKPNQTSP-------------IKDLSEE---------------------------------- 559
Fly 560 ---IILHELHFS------------TDYGLILTWLLNLSKKDYMCDAIFVYKE------------- 596
Fly 597 ---EHINEILIDNSPIHCESKVVNGQNTVSVIVPDSSSLEIG------ESYRFCLVMIQEQKPDS 652
Fly 653 EL-------NIGCSNITR----LERSSPGAVPVSRQYQRRPYYNANE-----------LKPEVVH 695
Fly 696 DAG--------------------------EDYQVNQRRFNSVVG----------SQPQQTQQSTL 724
Fly 725 LHSYTVIDSLNKSFLPGLGLGVLVTSVLVLIWGATRIRQTG--GSSGGGGRNGDSIDSNSSSMHN 787
Fly 788 NNNNSRPGTPTATTCYAASDH-IARLADAEN--GTRYL 822 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 8/33 (24%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 52/186 (28%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 322..382 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 370..428 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 418..478 | CDD:290566 | 16/67 (24%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 7/30 (23%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 4/22 (18%) | ||
LRRCT | 476..526 | CDD:214507 | 12/59 (20%) | ||
igsf10 | XP_009289666.1 | LRR_8 | 61..119 | CDD:290566 | 17/58 (29%) |
leucine-rich repeat | 61..84 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 85..108 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 107..167 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 109..132 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 133..156 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 157..188 | CDD:275380 | 7/30 (23%) | ||
leucine-rich repeat | 189..212 | CDD:275380 | 4/22 (18%) | ||
TPKR_C2 | 221..>238 | CDD:301599 | 8/16 (50%) | ||
Ig | 490..557 | CDD:299845 | 9/71 (13%) | ||
IG_like | 492..571 | CDD:214653 | 9/83 (11%) | ||
IG_like | 590..652 | CDD:214653 | 18/70 (26%) | ||
Ig | 594..655 | CDD:143165 | 18/69 (26%) | ||
IG_like | 1529..1612 | CDD:214653 | |||
Ig | 1538..1611 | CDD:299845 | |||
I-set | 1621..1709 | CDD:254352 | |||
Ig | 1632..1709 | CDD:299845 | |||
IG_like | 1724..1806 | CDD:214653 | |||
Ig | 1729..1806 | CDD:299845 | |||
I-set | 1813..1898 | CDD:254352 | |||
Ig | 1833..1905 | CDD:299845 | |||
I-set | 1918..2009 | CDD:254352 | |||
Ig | 1928..2009 | CDD:299845 | |||
IG | 2022..2101 | CDD:214652 | |||
IGc2 | 2028..2093 | CDD:197706 | |||
I-set | 2118..2203 | CDD:254352 | |||
Ig | 2134..2203 | CDD:299845 | |||
IG_like | 2218..2303 | CDD:214653 | |||
IGc2 | 2225..2293 | CDD:197706 | |||
I-set | 2307..2397 | CDD:254352 | |||
Ig | <2337..2397 | CDD:299845 | |||
IG_like | 2409..2496 | CDD:214653 | |||
Ig | 2420..2493 | CDD:143165 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |