Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001919144.3 | Gene: | mxra5a / 100151112 | ZFINID: | ZDB-GENE-090312-22 | Length: | 2516 | Species: | Danio rerio |
Alignment Length: | 636 | Identity: | 136/636 - (21%) |
---|---|---|---|
Similarity: | 225/636 - (35%) | Gaps: | 193/636 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 234 ALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLE 298
Fly 299 VLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQN 363
Fly 364 KALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHN 428
Fly 429 FLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQE 493
Fly 494 SQ-----------LHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHLETLAKP 547
Fly 548 NQTSPIKDLSEEIILHELHFSTDYGLILTW------LLNLSKKDYMCDAIFVYKEEHINEILIDN 606
Fly 607 SPIHCESKVVNGQNTVSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITRLERSSPGA 671
Fly 672 VPVSRQYQRRPYYN--ANELKPEVV--------HDAGEDYQVNQRRFNSV---VGSQPQQTQQST 723
Fly 724 LLHSYTVIDSLNKSFLPGLGLGVLVTSVL------------VLIWGATRIRQTGGSSGGGGRNGD 776
Fly 777 SIDSNSSSMHNNNNNS----RPGTPTATTCYAASDHIARLADAENGTRYLK 823 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 24/99 (24%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | 3/13 (23%) | ||
LRR_8 | 249..307 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | <270..479 | CDD:238064 | 50/208 (24%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 418..478 | CDD:290566 | 11/59 (19%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 0/22 (0%) | ||
LRRCT | 476..526 | CDD:214507 | 15/60 (25%) | ||
mxra5a | XP_001919144.3 | LRRNT | 24..55 | CDD:214470 | 3/15 (20%) |
leucine-rich repeat | 35..53 | CDD:275380 | 3/13 (23%) | ||
LRR_8 | 52..112 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 54..77 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 78..101 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 101..160 | CDD:290566 | 23/85 (27%) | ||
leucine-rich repeat | 102..125 | CDD:275380 | 13/49 (27%) | ||
LRR_4 | 125..165 | CDD:289563 | 12/39 (31%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 150..181 | CDD:275380 | 9/40 (23%) | ||
leucine-rich repeat | 182..205 | CDD:275380 | 9/52 (17%) | ||
LRRCT | 214..267 | CDD:214507 | 16/78 (21%) | ||
IG | 478..559 | CDD:214652 | 14/61 (23%) | ||
Ig | 485..545 | CDD:143165 | 12/48 (25%) | ||
IG | 573..657 | CDD:214652 | |||
IGc2 | 581..647 | CDD:197706 | |||
I-set | 1534..1626 | CDD:254352 | |||
Ig | 1554..1616 | CDD:299845 | |||
I-set | 1631..1727 | CDD:254352 | |||
Ig | 1646..1727 | CDD:299845 | |||
IG_like | 1740..1825 | CDD:214653 | |||
IGc2 | 1746..1815 | CDD:197706 | |||
IG_like | 1841..1926 | CDD:214653 | |||
IGc2 | 1849..1916 | CDD:197706 | |||
I-set | 1932..2030 | CDD:254352 | |||
IGc2 | 1946..2020 | CDD:197706 | |||
I-set | 2035..2124 | CDD:254352 | |||
IGc2 | 2050..2114 | CDD:197706 | |||
Ig | 2149..2224 | CDD:299845 | |||
IG | 2244..2321 | CDD:214652 | |||
IGc2 | 2246..2312 | CDD:197706 | |||
IG | 2334..2407 | CDD:214652 | |||
Ig | 2341..2416 | CDD:299845 | |||
IG | 2429..2515 | CDD:214652 | |||
Ig | 2439..2512 | CDD:143165 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |