Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009305418.1 | Gene: | lrit3b / 100144406 | ZFINID: | ZDB-GENE-070424-130 | Length: | 487 | Species: | Danio rerio |
Alignment Length: | 301 | Identity: | 68/301 - (22%) |
---|---|---|---|
Similarity: | 103/301 - (34%) | Gaps: | 123/301 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 234 ALMSVPWNALSTLSALERLDLANNKIK---------ALGTADFVGLTSLVYLELSNNQISSISQR 289
Fly 290 TFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLP--GMRNLESLN 352
Fly 353 LNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHL 417
Fly 418 SRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDC 482
Fly 483 SIRPFAEWLQESQLHSSL-----SASCVTPPRLEGAPLLQV 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 25/108 (23%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | 3/13 (23%) | ||
LRR_8 | 249..307 | CDD:290566 | 21/66 (32%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 5/31 (16%) | ||
LRR_RI | <270..479 | CDD:238064 | 48/210 (23%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 10/61 (16%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 3/25 (12%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 370..428 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 418..478 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 4/22 (18%) | ||
LRRCT | 476..526 | CDD:214507 | 14/48 (29%) | ||
lrit3b | XP_009305418.1 | LRRNT | 51..92 | CDD:214470 | 6/25 (24%) |
leucine-rich repeat | 69..89 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 112..172 | CDD:290566 | 28/136 (21%) | ||
leucine-rich repeat | 114..137 | CDD:275378 | 11/22 (50%) | ||
leucine-rich repeat | 138..161 | CDD:275378 | 10/75 (13%) | ||
LRR_8 | 160..214 | CDD:290566 | 22/85 (26%) | ||
LRR_4 | 160..201 | CDD:289563 | 16/64 (25%) | ||
leucine-rich repeat | 162..185 | CDD:275378 | 8/46 (17%) | ||
leucine-rich repeat | 186..199 | CDD:275378 | 6/12 (50%) | ||
leucine-rich repeat | 215..230 | CDD:275378 | 5/22 (23%) | ||
Ig | 278..391 | CDD:299845 | |||
I-set | 279..391 | CDD:254352 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |