Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005169675.1 | Gene: | flrt1b / 100144397 | ZFINID: | ZDB-GENE-080327-6 | Length: | 715 | Species: | Danio rerio |
Alignment Length: | 578 | Identity: | 143/578 - (24%) |
---|---|---|---|
Similarity: | 209/578 - (36%) | Gaps: | 158/578 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 ALSTLSALERLDLANNKIKALGTADFVG-----------------------------LTSLVYLE 277
Fly 278 LSNNQISSISQRTFVNLR-KLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQT 341
Fly 342 LPGMRNLESLNLNRNLIK--SIQNKALANFS--RLVSLSLRH-------------------NQID 383
Fly 384 VLQDHAFFGLGALDSLDLSYNGIV--AISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRE 446
Fly 447 LR--LAGNDISIVARNAMDGARELESLQ------------------------MQENPLSCDCSIR 485
Fly 486 PFAEWLQESQLHSSLSA---SCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHLETLAK- 546
Fly 547 --------PNQTSPIKDLSEEIILHEL---HFSTDYGL--------ILTWLLNLSKKDYMCDAIF 592
Fly 593 VYKEE-------HINEILIDNSPIHCESKVVNGQNTVSVIVPDS-----SSLEIGESYRFCLVMI 645
Fly 646 --QEQKPDSELNIGCSNI-TRLERSSPGAVPVSRQYQRRPYYNANELKPEVVHDAGED 700 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 33/121 (27%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | 2/5 (40%) | ||
LRR_8 | 249..307 | CDD:290566 | 19/87 (22%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 7/51 (14%) | ||
LRR_RI | <270..479 | CDD:238064 | 79/260 (30%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 26/82 (32%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 10/26 (38%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/80 (29%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 11/41 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 418..478 | CDD:290566 | 24/85 (28%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 9/24 (38%) | ||
LRRCT | 476..526 | CDD:214507 | 16/52 (31%) | ||
flrt1b | XP_005169675.1 | LRRNT | 51..77 | CDD:214470 | 0/25 (0%) |
leucine-rich repeat | 82..104 | CDD:275378 | 8/22 (36%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 6/24 (25%) | ||
LRR_RI | <120..305 | CDD:238064 | 62/194 (32%) | ||
LRR_8 | 124..186 | CDD:290566 | 24/67 (36%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 150..175 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 174..231 | CDD:290566 | 16/56 (29%) | ||
leucine-rich repeat | 176..196 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 197..220 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 221..246 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 247..268 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 268..326 | CDD:290566 | 11/57 (19%) | ||
leucine-rich repeat | 269..292 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 293..316 | CDD:275380 | 2/22 (9%) | ||
LRRCT | 325..375 | CDD:214507 | 16/51 (31%) | ||
fn3 | 448..515 | CDD:278470 | 12/73 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.960 |