Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096395.1 | Gene: | slitrk1 / 100124997 | XenbaseID: | XB-GENE-998737 | Length: | 696 | Species: | Xenopus tropicalis |
Alignment Length: | 777 | Identity: | 142/777 - (18%) |
---|---|---|---|
Similarity: | 230/777 - (29%) | Gaps: | 316/777 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 134 NITGTRNAELECGCDLPHTLRCNIDLHGMMLLADRLRTSPYSISLLDCSLRNVT----FLSDAKI 194
Fly 195 FDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI 259
Fly 260 KALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEV-----------------------LK 301
Fly 302 LGGNRLG--DYAQSLRSL--------------SQC--LSLRQ-------------------LDLQ 329
Fly 330 ANNLN------------------------------GPL--------------------------- 337
Fly 338 ---------------------------------SEQTL-PGMR---------------------- 346
Fly 347 ---------------------NLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAF 390
Fly 391 FGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGN-DI 454
Fly 455 SIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSASCVTPPRLEGAPLLQVP 519
Fly 520 VETLSCDMDNVEKDNANIMQHLETLAKPNQTSPIKDLSEEIILHEL--HFSTDY-GLILTWLLNL 581
Fly 582 SKKDYMCDAIFVYKEEHINEILIDNSPI-----HCESKVVNGQNTVSVIVPDSSSLEIGESYRF- 640
Fly 641 -CLVMIQEQKPDS---ELNIGCSNITRLERSSPGAVPVSRQYQRRPYYNANELKPEVVHDAG 698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 52/246 (21%) |
leucine-rich repeat | 179..199 | CDD:275378 | 4/23 (17%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 249..307 | CDD:290566 | 25/80 (31%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 10/22 (45%) | ||
LRR_RI | <270..479 | CDD:238064 | 72/403 (18%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 11/65 (17%) | ||
LRR_8 | 322..382 | CDD:290566 | 24/212 (11%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 12/176 (7%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 370..428 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 418..478 | CDD:290566 | 15/60 (25%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 5/23 (22%) | ||
LRRCT | 476..526 | CDD:214507 | 6/49 (12%) | ||
slitrk1 | NP_001096395.1 | leucine-rich repeat | 62..83 | CDD:275380 | 5/25 (20%) |
leucine-rich repeat | 84..107 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 108..166 | CDD:338972 | 21/57 (37%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 156..177 | CDD:275380 | 3/20 (15%) | ||
TPKR_C2 | 212..>249 | CDD:387596 | 5/36 (14%) | ||
leucine-rich repeat | 238..355 | CDD:275380 | 10/116 (9%) | ||
leucine-rich repeat | 356..376 | CDD:275380 | 0/19 (0%) | ||
LRR_8 | <375..411 | CDD:338972 | 5/35 (14%) | ||
leucine-rich repeat | 377..400 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 400..457 | CDD:338972 | 20/56 (36%) | ||
leucine-rich repeat | 401..424 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 425..448 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 448..506 | CDD:338972 | 19/58 (33%) | ||
leucine-rich repeat | 449..472 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 473..495 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 496..520 | CDD:275380 | 5/23 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |