DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11159 and Lyz3

DIOPT Version :10

Sequence 1:NP_611505.1 Gene:CG11159 / 37341 FlyBaseID:FBgn0034539 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_084182.2 Gene:Lyz3 / 77397 MGIID:1924647 Length:151 Species:Mus musculus


Alignment Length:147 Identity:54/147 - (36%)
Similarity:74/147 - (50%) Gaps:9/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KGGALFLVLNLLLLSQWETESKLLTRCQLAKELLR---HDFPRSYLSNWVCLVEAESGRSTSKSM 68
            |.....|.|.||||| ...:.|:..||.||:.|..   ..|....|:|||||.:.||..:|:.:.
Mouse     2 KAPLTLLTLGLLLLS-ITIQGKVYDRCSLARTLQSLGLAGFQGITLANWVCLAKWESNFNTNTTR 65

  Fly    69 QLP-NQSVSYGLFQINSKNWCRKGRRGG---ICNIKCEEFLNDEISDDSRCAMQIF-NRHGFQAW 128
            ..| :||.|||:|||||:.||..|:..|   .|.|.|:..|...|.....||.:|. :..|..:|
Mouse    66 FNPEDQSTSYGIFQINSRFWCNDGKTPGSRNFCRISCKALLKSNIWSAVVCAKRIVKDPQGIYSW 130

  Fly   129 PGWMSKCRGRTLPDVSR 145
            .||:..|:.:.|.:..|
Mouse   131 AGWIKHCKNKNLKEYIR 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11159NP_611505.1 LYZ_C_invert 28..146 CDD:381618 46/126 (37%)
Lyz3NP_084182.2 LYZ_C 22..149 CDD:340383 46/126 (37%)

Return to query results.
Submit another query.