DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11159 and Spaca3

DIOPT Version :10

Sequence 1:NP_611505.1 Gene:CG11159 / 37341 FlyBaseID:FBgn0034539 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_083643.1 Gene:Spaca3 / 75622 MGIID:1922872 Length:163 Species:Mus musculus


Alignment Length:146 Identity:56/146 - (38%)
Similarity:81/146 - (55%) Gaps:14/146 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALFLVLNLLLLSQWETESKLLTRCQLAKELLRHDFP----RSY-LSNWVCLVEAESGRSTSKSMQ 69
            ||..:|:.||.|   :::|:.:||:||||:  |||.    |.| |::||||....||.:|:....
Mouse    21 ALAYLLSCLLAS---SKAKVFSRCELAKEM--HDFGLDGYRGYNLADWVCLAYYTSGFNTNAVDH 80

  Fly    70 LPNQSVSYGLFQINSKNWCRKGRRGG--ICNIKCEEFLNDEISDDSRCAMQIFNRH-GFQAWPGW 131
            ..:.|.:.|:|||:|:.|||.....|  :|.|.|.:.||:::.|...|||:|.... |...|..|
Mouse    81 EADGSTNNGIFQISSRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKIVQEPLGLGYWEAW 145

  Fly   132 MSKCRGRTLPD-VSRC 146
            ...|:||.|.| |..|
Mouse   146 RHHCQGRDLSDWVDGC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11159NP_611505.1 LYZ_C_invert 28..146 CDD:381618 49/126 (39%)
Spaca3NP_083643.1 LYZ_C 36..161 CDD:340383 49/126 (39%)

Return to query results.
Submit another query.