DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11159 and Spaca5

DIOPT Version :10

Sequence 1:NP_611505.1 Gene:CG11159 / 37341 FlyBaseID:FBgn0034539 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_001101528.1 Gene:Spaca5 / 314431 RGDID:1584964 Length:160 Species:Rattus norvegicus


Alignment Length:136 Identity:45/136 - (33%)
Similarity:72/136 - (52%) Gaps:8/136 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVLNLLLLSQWETESKLLTRCQLAKELLR---HDFPRSYLSNWVCLVEAESGRSTSKSMQLPNQS 74
            ::|..|||:  ..::|:..||:||::|.:   :.|....:.:|:|:...|||..||.....|:.|
  Rat     9 VILATLLLA--TVDAKIYERCELARKLEKAGLNGFKGYTVGDWLCVAHYESGFDTSFVDHNPDGS 71

  Fly    75 VSYGLFQINSKNWCRKG--RRGGICNIKCEEFLNDEISDDSRCAMQIFNRH-GFQAWPGWMSKCR 136
            ..||:||:||..||..|  ....:|::.|.:.||..|.||..||.::.:.| ..:||..|...|.
  Rat    72 SEYGIFQLNSAWWCNNGITPTQNLCHMDCNDLLNRHILDDIMCAKRVVSSHKSMKAWDSWTRHCA 136

  Fly   137 GRTLPD 142
            |..|.:
  Rat   137 GHDLSE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11159NP_611505.1 LYZ_C_invert 28..146 CDD:381618 41/121 (34%)
Spaca5NP_001101528.1 LYZ_C 22..147 CDD:340383 41/121 (34%)

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