DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16799 and Lyc2

DIOPT Version :10

Sequence 1:NP_611504.2 Gene:CG16799 / 37340 FlyBaseID:FBgn0034538 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001381322.1 Gene:Lyc2 / 688047 RGDID:1593616 Length:148 Species:Rattus norvegicus


Alignment Length:133 Identity:45/133 - (33%)
Similarity:74/133 - (55%) Gaps:11/133 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LLQLGI----EQVESKKYQRCELTRVLVEN--YNFDKTFISNWICLVEHESYLDTTKVT-KKGNE 87
            ||.||.    ..|::|.::.|||.|:|..:  ..:....:.||:|:.:|||..||..:. ...::
  Rat     4 LLVLGFLLLSASVQAKVFKHCELARILRSSALAGYRGVSLENWMCMAQHESNFDTEAINYNSTDQ 68

  Fly    88 SKNYGLFQINSKDYCSEG---RKGGQCNMKCEDFSNDDISDDIACA-RMIQEREGFKYWKGWDRF 148
            |.:||:|||||:.:|::|   |....|.:.|.....|||:..|.|| |::::.:|.:.|..|.|.
  Rat    69 STDYGIFQINSRYWCNDGKTPRAVNACGIPCSALLQDDITQAIQCAKRVVRDPQGIRAWVAWQRH 133

  Fly   149 CRN 151
            |:|
  Rat   134 CQN 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16799NP_611504.2 LYZ_C_invert 41..158 CDD:381618 40/118 (34%)
Lyc2NP_001381322.1 LYZ1 19..147 CDD:197612 40/118 (34%)

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