DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16799 and Lyzl4

DIOPT Version :10

Sequence 1:NP_611504.2 Gene:CG16799 / 37340 FlyBaseID:FBgn0034538 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001233112.1 Gene:Lyzl4 / 363168 RGDID:1308401 Length:145 Species:Rattus norvegicus


Alignment Length:143 Identity:39/143 - (27%)
Similarity:69/143 - (48%) Gaps:8/143 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VLILLQLGIEQVESKKYQRCELTRVLVE---NYNFDKTFISNWICLVEHESYLDTTKVTKKGNE- 87
            ||:|:...:..:.:....||.:.:.|.:   || |:...:.||:||...||..:.:.|.:...: 
  Rat     6 VLLLISYLLTPIGASILGRCVVAKKLYDGGLNY-FEGYSLENWVCLAYFESKFNPSAVYENSRDG 69

  Fly    88 SKNYGLFQINSKDYCSEGRKGGQCNMKCEDFSNDDISDDIACA-RMIQEREGFKYWKGWDRFCRN 151
            |..:|||||...::|..|:  ..|::.|....|.::.|.|.|| ::::.::|...|..|.|.|:.
  Rat    70 STGFGLFQIRDNEWCDHGK--NLCSVSCTALLNPNLKDTIECAKKIVKGKQGMGAWPVWSRNCQL 132

  Fly   152 PQNLPNLRVACNL 164
            ...|......|.|
  Rat   133 SDILDRWLDGCEL 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16799NP_611504.2 LYZ_C_invert 41..158 CDD:381618 34/121 (28%)
Lyzl4NP_001233112.1 LYZ_C 21..143 CDD:340383 34/124 (27%)

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