DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16799 and Spaca3

DIOPT Version :10

Sequence 1:NP_611504.2 Gene:CG16799 / 37340 FlyBaseID:FBgn0034538 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001099290.1 Gene:Spaca3 / 287557 RGDID:1306684 Length:163 Species:Rattus norvegicus


Alignment Length:138 Identity:42/138 - (30%)
Similarity:70/138 - (50%) Gaps:16/138 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WIVPVLILLQLGIEQVESKKYQRCELTRVL-------VENYNFDKTFISNWICLVEHESYLDTTK 80
            |:. :..||...:...::|.:.||||.:||       ...||     :::||||..:.|..:|..
  Rat    19 WLA-LAYLLSCLLASSKAKVFSRCELAKVLHDFGLEGYRGYN-----LADWICLAYYTSGFNTDA 77

  Fly    81 VTKKGNESKNYGLFQINSKDYCSEGRKGGQ--CNMKCEDFSNDDISDDIACA-RMIQEREGFKYW 142
            |..:.:.|.|.|:|||:|:.:|......|.  |.:.|.|..::|:.|.:||. ::.||.:|..||
  Rat    78 VDHEADGSTNNGIFQISSRKWCKNLAPNGPNLCRIYCTDLLSNDLKDSVACVMKIAQEPQGLGYW 142

  Fly   143 KGWDRFCR 150
            :.|...|:
  Rat   143 ESWKHHCQ 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16799NP_611504.2 LYZ_C_invert 41..158 CDD:381618 39/120 (33%)
Spaca3NP_001099290.1 LYZ_C 36..161 CDD:340383 39/120 (33%)

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