DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16799 and Lalba

DIOPT Version :10

Sequence 1:NP_611504.2 Gene:CG16799 / 37340 FlyBaseID:FBgn0034538 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_036726.1 Gene:Lalba / 24528 RGDID:2987 Length:159 Species:Rattus norvegicus


Alignment Length:160 Identity:45/160 - (28%)
Similarity:77/160 - (48%) Gaps:20/160 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VPVLILLQLGIEQVESKKYQRCELTRVLVENYNFDKTFISNWICLVEHESYLDTTKVTKKGNESK 89
            || |.|..:.:...::.::.:||::..:.:...:....:..|.|::.|.|..|:..:. |.|.|.
  Rat     5 VP-LFLACISLPAFQATEFTKCEVSHAIEDMDGYQGISLLEWTCVLFHTSGYDSQAIV-KNNGST 67

  Fly    90 NYGLFQINSKDYCSEG---RKGGQCNMKCEDFSNDDISDDIACARMIQEREGFKYWKG------- 144
            .||||||:::::|...   .....|::.|:.|.:|:::|||.||:.|...:|..|||.       
  Rat    68 EYGLFQISNRNWCKSSEFPESENICDISCDKFLDDELADDIVCAKKIVAIKGIDYWKAHKPMCSE 132

  Fly   145 ----WDRFCRNPQNLPNLRVACNLRSLSPV 170
                |.  |..| ..|.|.|.. |.|.:||
  Rat   133 KLEQWR--CEKP-GAPALVVPA-LNSETPV 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16799NP_611504.2 LYZ_C_invert 41..158 CDD:381618 35/130 (27%)
LalbaNP_036726.1 Lys 20..137 CDD:395016 31/117 (26%)

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