DRSC/TRiP Functional Genomics Resources

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Protein Alignment DMAP1 and SWC4

DIOPT Version :9

Sequence 1:NP_611503.1 Gene:DMAP1 / 37339 FlyBaseID:FBgn0034537 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_011516.1 Gene:SWC4 / 852885 SGDID:S000003234 Length:476 Species:Saccharomyces cerevisiae


Alignment Length:507 Identity:117/507 - (23%)
Similarity:210/507 - (41%) Gaps:140/507 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SADVRDILDM-ERANTPEVTRDSFLATKKRNFERTKTASRRPE----GMHREVFALLYTDKKDAP 61
            |:|:.|:|:: :::.:|         |..:....:.:|:.||:    ||.||:|.||   .::.|
Yeast     3 SSDIFDVLNIKQKSRSP---------TNGQVSVPSSSAANRPKPQVTGMQRELFNLL---GENQP 55

  Fly    62 PLLPTDTALGIGAGYKETKARLGMKKVRKWEWAPFSNPARNDSAVFHHWKR-----VTDNSTDYP 121
            |::     :..|..:||  ..|...|...|.:..|.   .|:|....||.:     :.|...:.|
Yeast    56 PVV-----IKSGNNFKE--KMLSTSKPSPWSFVEFK---ANNSVTLRHWVKGSKELIGDTPKESP 110

  Fly   122 FAKFNKQLEVPSYTMTEYNAHLRNN-------------------------INNWSKVQTDHLFDL 161
            ::|||:.|.:||:|..||.|.:..|                         .|:||..:.::||:|
Yeast   111 YSKFNQHLSIPSFTKEEYEAFMNENEGTQKSVESEKNHNENFTNEKKDESKNSWSFEEIEYLFNL 175

  Fly   162 ARRFDLRFIVMADRWNRQQHGTKTVEELKERYYEVVALLAKAKNQTSE-KKVFVYDVEHERRRKE 225
            .:::|||:.::.||::  .:.::|:|:|||::|.......||.:.::. .....:..|.|..||:
Yeast   176 CKKYDLRWFLIFDRYS--YNNSRTLEDLKEKFYYTCRNYFKASDPSNPLLSSLNFSAEKEIERKK 238

  Fly   226 QLEKLFKRTTQQVEEENMLINEMKKIEARKK----ERER----------------------KTQD 264
            .|::|..|:..::.||..|:.|.||.|...|    |||.                      .:|.
Yeast   239 YLQRLLSRSAAEIAEEEALVVESKKFEMAAKRTLAERESLLRLLDSPHSDQTITQYLTSQGMSQL 303

  Fly   265 LQKLISQADQQNEHASNTP--------------------STRKYEKK--LHKKKVHQQPRPSRV- 306
            ...|::...::.:|..|.|                    :.:|.|.|  |..||..:|.:..:. 
Yeast   304 YNALLADKTRKRKHDLNIPENPWMKQQQQFAQHRQLQQLNVKKSEVKENLSPKKTKRQRQEMQTA 368

  Fly   307 -----DSV--------VNAIEIGSSG-IKFADLRGSGVSLRSQRMKLPANIGQRKVKALEQAIQE 357
                 :|.        .|:.|..:.| |...:....||.|||.::.......|.|:.|:   :||
Yeast   369 LKRKSESAYAEQLLKDFNSDERKALGVITHGEKLSPGVYLRSTKLSTFKPALQNKILAI---LQE 430

  Fly   358 FKVDPAPPPTEDICTSFNELRSDMVLLCELRTALSTCVYEMESLKH--QYEA 407
            ..:     |:..:..||:.:.....||.::.|.:       :..||  :|||
Yeast   431 LSL-----PSRPVMPSFDVMERQEELLKKINTLI-------DLKKHVDKYEA 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DMAP1NP_611503.1 SANT_DAMP1_like 120..200 CDD:318509 29/104 (28%)
DMAP1 240..412 CDD:310242 49/233 (21%)
SWC4NP_011516.1 SANT_DAMP1_like 109..213 CDD:406645 29/105 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345598
Domainoid 1 1.000 59 1.000 Domainoid score I2602
eggNOG 1 0.900 - - E1_KOG2656
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 105 1.000 Inparanoid score I1423
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005191
OrthoInspector 1 1.000 - - oto99561
orthoMCL 1 0.900 - - OOG6_102680
Panther 1 1.100 - - LDO PTHR12855
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1419
SonicParanoid 1 1.000 - - X3704
TreeFam 1 0.960 - -
1312.780

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