DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DMAP1 and swc4

DIOPT Version :10

Sequence 1:NP_611503.1 Gene:DMAP1 / 37339 FlyBaseID:FBgn0034537 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_593568.2 Gene:swc4 / 2542412 PomBaseID:SPAC9G1.13C Length:437 Species:Schizosaccharomyces pombe


Alignment Length:448 Identity:128/448 - (28%)
Similarity:204/448 - (45%) Gaps:87/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SADVRDILDMERANTPEVTRDSFLATKKRNFERTKT-ASRRPEGMHREVFALLYTDKKDAPPLLP 65
            |||:||:.::.   .||:          .|.:::|| ..|||||:.||:::||  .:..||    
pombe     3 SADIRDVFELP---PPEI----------GNKQKSKTPTERRPEGISRELYSLL--GENSAP---- 48

  Fly    66 TDTALGIGAGYKETKARLGMKKVRKWEWAPFSNPARNDSAVFHHW--KRVTDNSTDYPFAKFNKQ 128
                |.|.....:.|.::. .|.:.|...|||..:|.|....|||  |...|:...|.|.|||..
pombe    49 ----LAIYQKKFKEKPKVS-HKAKNWVRQPFSISSRKDDFTLHHWVLKSEVDSEASYKFEKFNVP 108

  Fly   129 LEVPSYTMTEYNAHLRNNINNWSKVQTDHLFDLARRFDLRFIVMADRWNRQQHGT-KTVEELKER 192
            |.:..||..||..:|::  .:|:|.:||:||.|.:.:||||.|:|||::.:::.. :|:|:||:|
pombe   109 LFIIDYTDEEYQNYLKD--EDWNKDETDYLFRLCKDYDLRFFVIADRYDNEKYKKHRTLEDLKDR 171

  Fly   193 YYEVVALLAKAKN--------QTSEKKVFVYDVEHERRRKEQLEKLFKRTTQQVEEENMLINEMK 249
            :|.|...:..|:|        |:|......|:.|.|..||:.|..|..||.::|.||..|..|:|
pombe   172 FYSVSRKILLARNPINSMTAAQSSLLNTMEYNKEQEVIRKKYLIGLASRTPEEVAEEEALFIELK 236

  Fly   250 KIEARKKERERKTQDLQKLISQADQQNE----HASNTP-----------STRKYEKKLHKKKVHQ 299
            :||.   .:.:...|..:::...|:|..    |..:|.           ::::.:.|:.:..|..
pombe   237 RIET---SQAKLLSDRDEVLRLLDEQKGDGGIHEYHTSAGMSSLIQDMINSQRTKNKVEEAIVSS 298

  Fly   300 QPRPSRVDSVVNA-----------IEIGSS------GIKFADLRGSGVSLRSQRMKLPANIGQRK 347
            ....|.|.||:|.           |..|..      ||.:.:....|..:|||  |:||      
pombe   299 SAPSSGVSSVLNTPTRPHALSTPRIRYGPQPTDPQFGITWHEKLHPGTFVRSQ--KIPA------ 355

  Fly   348 VKA-LEQAIQEFKVDPAPP-----PTEDICTSFNELRSDMVLLCELRTALSTCVYEME 399
            :|| |.|.:.....:....     ||......|.||::.:|.|.||:..:.....|.|
pombe   356 IKASLSQRVSSVMTELGVSSRLIMPTAKNFEKFVELQNSIVSLLELKRKVDRLSQETE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DMAP1NP_611503.1 SANT_DAMP1_like 120..201 CDD:465084 33/81 (41%)
DMAP1 240..412 CDD:398903 45/198 (23%)
swc4NP_593568.2 SANT_DAMP1_like 100..180 CDD:465084 33/81 (41%)

Return to query results.
Submit another query.