DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11110 and mmp1

DIOPT Version :10

Sequence 1:NP_611501.1 Gene:CG11110 / 37337 FlyBaseID:FBgn0034535 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_596226.1 Gene:mmp1 / 2540493 PomBaseID:SPBC2D10.07C Length:157 Species:Schizosaccharomyces pombe


Alignment Length:150 Identity:44/150 - (29%)
Similarity:73/150 - (48%) Gaps:21/150 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LYALPLGVTFL--------DCVGYVARVDGISMQPALNPVPDEKDYVFLLR-WGTHNSQVERGDI 66
            ::.:|:.|..:        :.:..|....|.||.|.||   ...::|.|.: .|........||:
pombe     4 MFRIPIAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLN---SGGEFVLLDKLHGRFARSCSVGDV 65

  Fly    67 ISLISPKDPAQKIIKRVVGLQGDVVSTLGY-----KHEIVRVPEGHCWVEGDHTGHSMDSNTFGP 126
            :....|.|..|.:.||::|:.||.:    |     .::.:.:|.||.|:.||:..||:||..:||
pombe    66 VVSAKPSDSKQHVCKRIIGMPGDTI----YVDPTSSNKKITIPLGHVWLAGDNIAHSLDSRNYGP 126

  Fly   127 VALGLMSARAVAIVWPPERW 146
            |.:||:.|:.:|.|||...|
pombe   127 VPMGLIKAKVIARVWPHPHW 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11110NP_611501.1 sigpep_I_bact 27..142 CDD:274044 39/120 (33%)
mmp1NP_596226.1 sigpep_I_bact 24..142 CDD:274044 39/124 (31%)

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