DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment maf-S and Nrl

DIOPT Version :9

Sequence 1:NP_001286639.1 Gene:maf-S / 37336 FlyBaseID:FBgn0034534 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_001129546.1 Gene:Nrl / 18185 MGIID:102567 Length:237 Species:Mus musculus


Alignment Length:96 Identity:42/96 - (43%)
Similarity:67/96 - (69%) Gaps:7/96 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IPD-ITDDDLVSISVRDLNRTLKMRGLNREEIVRMKQRRRTLKNRGYAASCRIKRIEQKDELETK 87
            :|: .:|..|||:|||:|||  ::||..|:|.:|:|||||||||||||.:||.||::|:..||.:
Mouse   128 LPERFSDAALVSMSVRELNR--QLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAE 190

  Fly    88 KSYEWTELEQMHEDNEQVRREVSNWKNKYKA 118
            ::....:|:.:..:..::.||    ::.|||
Mouse   191 RARLAAQLDALRAEVARLARE----RDLYKA 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maf-SNP_001286639.1 bZIP_Maf_small 51..120 CDD:269865 29/68 (43%)
coiled coil 59..110 CDD:269865 22/50 (44%)
NrlNP_001129546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..64
Minimal transactivation domain (MTD). /evidence=ECO:0000250|UniProtKB:P54845 30..93
Maf_N 67..101 CDD:285569
bZIP_Maf_large 154..223 CDD:269866 29/68 (43%)
coiled coil 154..223 CDD:269866 29/68 (43%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 159..185 19/25 (76%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 187..208 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833880
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4196
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1395389at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.