| Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_012962.3 | Gene: | CAF4 / 853908 | SGDID: | S000001744 | Length: | 643 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 519 | Identity: | 97/519 - (18%) |
|---|---|---|---|
| Similarity: | 190/519 - (36%) | Gaps: | 133/519 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 312 VEACESVKAELLASRQEDKTQHVEVTLHDCEPTKPTGPLSDASTISNK-------NDASDSTEGS 369
Fly 370 LEVIQYSSSSDDAVIVDGEAAKPKREVLHHIYHQAEVHASGT--------PQTKSEPQSNLQVVP 426
Fly 427 AISAETI-------------SLTSVN-STHLETLLVSIDGDEVMMIWNTNTGAHAGKNYSKSKTA 477
Fly 478 GKLNNVYWL-----NNHVIVSLSRH-QLFFWSVEFERKM-LRYKISKDKSHSCHLQDIVSFACDS 535
Fly 536 SKEMIWLCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNKIALGCSDRRVAFFDISKL 600
Fly 601 TTSCL-PIDSVY--VSSNVYCLAWSPN---CL----------------ELAFGTFDGTVGILDVE 643
Fly 644 RMKVKTHLRTPHKKEVYSLVW-QDHFIYFIVNRVLGFFDLRKSKIEPTIVNCISRPSYLSIRDSF 707
Fly 708 LFVGTDDGLLQIH--ERDSGMEKSWSPFIRQSALFARYVTDIAWCPLDSNKFAVSG-NDRSVYV 768 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
| WD40 | 80..>215 | CDD:225201 | |||
| WD40 repeat | 116..160 | CDD:293791 | |||
| WD40 repeat | 167..204 | CDD:293791 | |||
| WD40 | 434..821 | CDD:225201 | 74/369 (20%) | ||
| WD40 | 446..719 | CDD:295369 | 60/302 (20%) | ||
| WD40 | 613..874 | CDD:295369 | 40/179 (22%) | ||
| WD40 repeat | 617..654 | CDD:293791 | 15/55 (27%) | ||
| WD40 repeat | 659..691 | CDD:293791 | 7/32 (22%) | ||
| WD40 repeat | 693..732 | CDD:293791 | 8/40 (20%) | ||
| WD40 repeat | 744..785 | CDD:293791 | 5/26 (19%) | ||
| WD40 repeat | 793..831 | CDD:293791 | |||
| WD40 repeat | 838..861 | CDD:293791 | |||
| CAF4 | NP_012962.3 | Caf4 | 65..124 | CDD:402971 | |
| WD40 | 318..641 | CDD:238121 | 74/372 (20%) | ||
| WD40 repeat | 322..360 | CDD:293791 | 10/43 (23%) | ||
| WD40 repeat | 366..422 | CDD:293791 | 11/71 (15%) | ||
| WD40 repeat | 427..461 | CDD:293791 | 7/45 (16%) | ||
| WD40 repeat | 472..526 | CDD:293791 | 15/54 (28%) | ||
| WD40 repeat | 532..563 | CDD:293791 | 7/30 (23%) | ||
| WD40 repeat | 571..611 | CDD:293791 | 9/39 (23%) | ||
| WD40 repeat | 617..641 | CDD:293791 | 6/28 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||