| Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_011302.1 | Gene: | SKI8 / 852659 | SGDID: | S000003181 | Length: | 397 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 517 | Identity: | 95/517 - (18%) |
|---|---|---|---|
| Similarity: | 171/517 - (33%) | Gaps: | 197/517 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 427 AISAETISLTSVNSTHLETLLVSIDGDEVMMIW------NTNTGAHAGKNYSKSKTAGKLNNVYW 485
Fly 486 LNNHVIVSLSRHQL---FFWSVEFERKMLRYKISKDKSHSCHLQDIVSFACDSSKEMIWLCRNNR 547
Fly 548 QIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNK-----IALGCS-DR----RVAFFDISKLTT 602
Fly 603 SCLPIDSVYVSSNVYCLAWSPNCLEL-------------------------AFGTFDGTVGILDV 642
Fly 643 ERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPTIVNCISRPSYLSI-RDS 706
Fly 707 FLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDIAWCPLDSNKFAVSGNDRSVYVMEF 771
Fly 772 QPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKVCLWNCNAPEKPPLTITYHCPM 836
Fly 837 WCGMFLPTNENIIMCS--GKALSVE-LIDIKDALEG---------DEKSICPKVDALLNVKW 886 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
| WD40 | 80..>215 | CDD:225201 | |||
| WD40 repeat | 116..160 | CDD:293791 | |||
| WD40 repeat | 167..204 | CDD:293791 | |||
| WD40 | 434..821 | CDD:225201 | 78/431 (18%) | ||
| WD40 | 446..719 | CDD:295369 | 60/317 (19%) | ||
| WD40 | 613..874 | CDD:295369 | 54/298 (18%) | ||
| WD40 repeat | 617..654 | CDD:293791 | 13/61 (21%) | ||
| WD40 repeat | 659..691 | CDD:293791 | 4/31 (13%) | ||
| WD40 repeat | 693..732 | CDD:293791 | 10/39 (26%) | ||
| WD40 repeat | 744..785 | CDD:293791 | 5/40 (13%) | ||
| WD40 repeat | 793..831 | CDD:293791 | 7/37 (19%) | ||
| WD40 repeat | 838..861 | CDD:293791 | 4/25 (16%) | ||
| SKI8 | NP_011302.1 | WD40 | 13..351 | CDD:421866 | 87/474 (18%) |
| WD40 repeat | 19..60 | CDD:293791 | 13/48 (27%) | ||
| WD40 repeat | 66..119 | CDD:293791 | 10/101 (10%) | ||
| WD40 repeat | 124..180 | CDD:293791 | 18/57 (32%) | ||
| WD40 repeat | 190..224 | CDD:293791 | 6/33 (18%) | ||
| WD40 repeat | 236..275 | CDD:293791 | 14/51 (27%) | ||
| WD40 repeat | 294..330 | CDD:293791 | 10/62 (16%) | ||
| WD40 repeat | 357..391 | CDD:293791 | 7/36 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||