Protein Alignment rig and AT3G51930

DIOPT Version :10

• Sequence 1: NP_611499.3
• Gene: rig / 37335
• FlyBaseID: FBgn0250850
• Length: 1235
• Species: Drosophila melanogaster
• Sequence 2: NP_190761.1
• Gene: AT3G51930 / 824356
• AraportID: AT3G51930
• Length: 415
• Species: Arabidopsis thaliana
• Alignment Length: 144
• Identity: 37/144 - (25%)
• Similarity: 60/144 - (41%)
• Gaps: 39/144 - (27%)

  Fly   314 ACESVKAELLASRQEDKTQHVEVTLHDCEPTKPTGPLSDASTISNKNDASDSTEGSL--EVIQYS 376
            :|.:|.|.::.|...|||..|             ..|||...:.:.....|:..|.:  :...||
plant   178 SCLAVHAGIIYSGSWDKTLKV-------------WRLSDLKCLESIKAHDDAINGLVAGDGRVYS 229

  Fly   377 SSSDDAVIVDGEAAKPKREVLHHIYHQAEVHASGTPQTKSEPQSNLQVVPAISAETISLTSVNST 441
            :|:|..|.:.|   |.||:.:               ::.|...|:|.|:.| :.|..:..||||
plant   230 ASADGKVKIWG---KEKRKQI---------------ESTSSSSSSLHVLKA-TLEGRAEVSVNS- 274

  Fly   442 HLETLLVSIDGDEV 455
                ::||.||:.|
plant   275 ----VVVSGDGNWV 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rig	NP_611499.3	WD40 repeat	116..160	CDD:293791
		WD40 repeat	167..204	CDD:293791
		WD40	446..719	CDD:475233	5/10 (50%)
		WD40	613..874	CDD:475233
		WD40 repeat	617..654	CDD:293791
		WD40 repeat	659..691	CDD:293791
		WD40 repeat	693..732	CDD:293791
		WD40 repeat	744..785	CDD:293791
		WD40 repeat	793..831	CDD:293791
		WD40 repeat	838..861	CDD:293791
AT3G51930	NP_190761.1	WD40	53..392	CDD:475233	37/144 (26%)
		WD40 repeat	105..145	CDD:293791
		WD40 repeat	178..211	CDD:293791	11/45 (24%)
		WD40 repeat	217..265	CDD:293791	15/66 (23%)
		WD40 repeat	272..314	CDD:293791	8/18 (44%)
		WD40 repeat	321..343	CDD:293791