Protein Alignment rig and AT2G26490

DIOPT Version :10

• Sequence 1: NP_611499.3
• Gene: rig / 37335
• FlyBaseID: FBgn0250850
• Length: 1235
• Species: Drosophila melanogaster
• Sequence 2: NP_180217.1
• Gene: AT2G26490 / 817190
• AraportID: AT2G26490
• Length: 465
• Species: Arabidopsis thaliana
• Alignment Length: 488
• Identity: 89/488 - (18%)
• Similarity: 178/488 - (36%)
• Gaps: 129/488 - (26%)

  Fly   392 PKREVLHHIYHQAEVHASGTPQTKSEPQSNLQVVPAISAETISLTSVNSTHLETLLVSIDGDEVM 456
            |:.:..:.::....:.::.|.||:.|          ......|.::|.:...:.:  |.:|..:|
plant     9 PRAKYANMMHSDPNLSSTMTQQTEEE----------YGIRNSSASAVGTGMYDRM--SCEGSPMM 61

  Fly   457 MI-WNTNTGAHAGKNYSKSKTAGKLNNVYWLNNHVIVSLSRHQLFFWSVEFERKMLRYKISKDKS 520
            |. ||..|      .:::::.:....|:  ..|.:|.||.|.:...:|:...:.:| |..|..|:
plant    62 MSPWNQAT------PFTQTQWSTVEENL--PQNGLIGSLVREEGHIYSLAATKDLL-YTGSDSKN 117

  Fly   521 HSC--HLQDIVSFACDS--------SKEMIWLCRNNRQIGM--MNPKTGRMADFYGTVAFGVRAM 573
            ...  :|::..:|.|:|        |.|.|:....:.:|.:  ::||...:....||:
plant   118 IRVWKNLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTL------- 175

  Fly   574 AECP--DDMNKIALGCSDRRVAFFDISKLTT----------SCLPIDSVYVSSNVYCLAW----- 621
               |  .|:.|.:|    :...:.::.|..|          |||.::.  ....:|..:|
plant   176 ---PTLKDIFKASL----KPRNYVEVKKHRTALWIKHADAVSCLSLND--EQGLLYSASWDRTIK 231

  Fly   622 -----SPNCLE------------------LAF-GTFDGTVGILDVERM-KVKTH--LRTPHKKE- 658
                 ...|||                  :.| |:.||||.....::. |...|  ::|..|:|
plant   232 VWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQES 296

  Fly   659 -VYSLVWQDH--FIYF-----IVNRVLGFFDLRKS-------KIEPTIVNCISRPSYLSIRDSFL 708
             |.:|....:  .:||     :||    |::..|.       |.....|.|      |.:..|.:
plant   297 AVTALAVSKNGAAVYFGSSDGLVN----FWEREKQLNYGGILKGHKLAVLC------LEVAGSLV 351

  Fly   709 FVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDIAWCPLDSNKFAVSGNDRS--VYVMEF 771
            |.|:.|..:.:.:||..:....|       :...:...:....:::::.|....|:.  ||....
plant   352 FSGSADKTICVWKRDGNIHTCLS-------VLTGHTGPVKCLAVEADREASERRDKKWIVYSGSL 409

  Fly   772 QPTERNWKTLHTFTANTEKASITSMRWSHTQKH 804
            ..:.:.|....:|....:.:.:...:..|...|
plant   410 DKSVKVWGVSESFIDMNQMSMMQQQQQQHVISH 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rig	NP_611499.3	WD40 repeat	116..160	CDD:293791
		WD40 repeat	167..204	CDD:293791
		WD40	446..719	CDD:475233	71/345 (21%)
		WD40	613..874	CDD:475233	43/242 (18%)
		WD40 repeat	617..654	CDD:293791	13/68 (19%)
		WD40 repeat	659..691	CDD:293791	9/45 (20%)
		WD40 repeat	693..732	CDD:293791	8/38 (21%)
		WD40 repeat	744..785	CDD:293791	5/42 (12%)
		WD40 repeat	793..831	CDD:293791	2/12 (17%)
		WD40 repeat	838..861	CDD:293791
AT2G26490	NP_180217.1	WD40	96..416	CDD:238121	65/353 (18%)
		WD40 repeat	137..171	CDD:293791	6/33 (18%)
		WD40 repeat	210..245	CDD:293791	8/36 (22%)
		WD40 repeat	251..288	CDD:293791	8/36 (22%)
		WD40 repeat	298..335	CDD:293791	8/40 (20%)
		WD40 repeat	341..363	CDD:293791	7/27 (26%)
		WD40 repeat	383..416	CDD:293791	4/32 (13%)