Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001339880.4 | Gene: | gemin5 / 799538 | ZFINID: | ZDB-GENE-031112-9 | Length: | 1440 | Species: | Danio rerio |
Alignment Length: | 1336 | Identity: | 253/1336 - (18%) |
---|---|---|---|
Similarity: | 428/1336 - (32%) | Gaps: | 480/1336 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 INYISAPPA-NGEQPQVVTMSTRINILALDVSPMWGLGNGGPTKPFAIVGDDLSVQVWDCALGEA 99
Fly 100 VIGHKAHQHQHEARDVRVVHHTTNSVLMSYLANGNILSMDASDLVIYCVASNTYCRRSTFISPRN 164
Fly 165 HQLTMVRCSPYNDNLFAVGTAMGNVLVCDL-RKMNIVYKFHGHKAPICGLAWREVPAAEDEKTNN 228
Fly 229 LALSAEEWRSRNGGQEEKPKTKPPPLTKSKAAESDDPFDIYNFDHLEYEFGAPIAERRRKSSEDC 293
Fly 294 GGEFVGLEKPAGAAVLDFVEACESVKAELLASRQEDKTQHVEVTLHDCEPTKPTGPLSDASTISN 358
Fly 359 KNDASDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKREVLHHIYHQAEVHASGTPQTKSEPQSNLQ 423
Fly 424 VVPAISAETISLTSVNSTHLETLLVSIDGDEVMMIWNT--NTGAHAGK-NYSKSKTAG---KLNN 482
Fly 483 VYWLNNH--------VIVSLSRHQLFFWSVEFERKM---LRYKISKDKSHSCHLQDIVSFACDSS 536
Fly 537 KEMIWLCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNKIALGCSDRRVAFFDISKLT 601
Fly 602 TSCLPIDSVY--------VSSNVYCLAWSPNCLE---LAFGTFDGTVGILDVERMKVKTHLRTPH 655
Fly 656 KKEVYSLVW------------QDHFIYFIVN----RVLGFFDLRKSKIEPTIVNCISR------- 697
Fly 698 --PSYLSIR----DSFLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARY---VTDIAWCPLD 753
Fly 754 SNK------FAVSGNDRSVYVMEFQ-----PTERN---WKTLHTFTANTEKASITSMRWS-HTQK 803
Fly 804 HLLLTFHIEGKVCLWNCNAPEKPPLTITYH-----CPMWCGMFLPTNENIIMCSGKALSVELIDI 863
Fly 864 KDALEGDEKSICPKVDALLNVKWA---SKSLTQPYAPVLTAAEKKR--QRRDQRKAAAKLEVDVA 923
Fly 924 NKDQKKIQESVTAVIDNPTNDKCTQETPVEEMLEALS----------LDKEQNNRSAKECPKCKE 978
Fly 979 QSPDSFTHSRTCLYLTQKELNKSALEKLAIVLTEDSAKIDKSVLISKLFSSKVMAKELIATELTN 1043
Fly 1044 LKHSNTKDIAPLCLAMSTFK-------------------------------LREELEQHI----- 1072
Fly 1073 ---------------------ANKTLTERHVSLAPSVSFTLWQDCCRAYAKQMEEKGYIMHAATY 1116
Fly 1117 LFSQGMQSEAIKLFLANEYYKEALVHARICLPATDPLIKTVINNWLEHLEGTGNFAAAALICVLD 1181
Fly 1182 NEMLRGYSYLRKYRNCTPEIADLMDQIKRIGQLGGV 1217 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | 38/135 (28%) |
WD40 | 80..>215 | CDD:225201 | 38/135 (28%) | ||
WD40 repeat | 116..160 | CDD:293791 | 10/43 (23%) | ||
WD40 repeat | 167..204 | CDD:293791 | 13/37 (35%) | ||
WD40 | 434..821 | CDD:225201 | 96/461 (21%) | ||
WD40 | 446..719 | CDD:295369 | 76/329 (23%) | ||
WD40 | 613..874 | CDD:295369 | 65/315 (21%) | ||
WD40 repeat | 617..654 | CDD:293791 | 16/39 (41%) | ||
WD40 repeat | 659..691 | CDD:293791 | 11/47 (23%) | ||
WD40 repeat | 693..732 | CDD:293791 | 7/51 (14%) | ||
WD40 repeat | 744..785 | CDD:293791 | 7/54 (13%) | ||
WD40 repeat | 793..831 | CDD:293791 | 12/38 (32%) | ||
WD40 repeat | 838..861 | CDD:293791 | 2/22 (9%) | ||
gemin5 | XP_001339880.4 | WD40 | 17..449 | CDD:225201 | 119/645 (18%) |
WD40 | 47..391 | CDD:295369 | 94/575 (16%) | ||
WD40 repeat | 57..94 | CDD:293791 | 8/43 (19%) | ||
WD40 repeat | 102..139 | CDD:293791 | 10/44 (23%) | ||
WD40 repeat | 145..183 | CDD:293791 | 13/37 (35%) | ||
WD40 repeat | 188..263 | CDD:293791 | 29/273 (11%) | ||
WD40 repeat | 271..313 | CDD:293791 | 6/41 (15%) | ||
WD40 | 281..710 | CDD:225201 | 92/480 (19%) | ||
WD40 repeat | 320..357 | CDD:293791 | 6/37 (16%) | ||
WD40 | 331..694 | CDD:295369 | 78/413 (19%) | ||
WD40 repeat | 365..405 | CDD:293791 | 9/46 (20%) | ||
WD40 repeat | 412..437 | CDD:293791 | 15/26 (58%) | ||
WD40 repeat | 456..558 | CDD:293791 | 19/110 (17%) | ||
WD40 repeat | 564..619 | CDD:293791 | 7/54 (13%) | ||
WD40 repeat | 625..650 | CDD:293791 | 9/25 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 87 | 1.000 | Inparanoid score | I5123 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D283127at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_106770 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46362 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.970 |