| Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_076469.1 | Gene: | Apaf1 / 78963 | RGDID: | 620575 | Length: | 1249 | Species: | Rattus norvegicus |
| Alignment Length: | 805 | Identity: | 129/805 - (16%) |
|---|---|---|---|
| Similarity: | 228/805 - (28%) | Gaps: | 398/805 - (49%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 86 DLSVQVWDCALGEAVIGHKAHQHQHEARDVRVVHHT--TNSVLMSYLANGNILSMDASDLVIYCV 148
Fly 149 ASNTYCRRSTFISPRNHQLTMVRCSPYNDNLFAVGTAMGNVLVCDLRKMNIVYKFHGHKAPICGL 213
Fly 214 AWREVPAAEDEKTNNLALSAEEWRSRNGGQEEKPKTKPPPLTKSKAAESDDPFDIYNFDHLEYEF 278
Fly 279 GAPIAERRRKSSEDCGGEFVGLEKPAGAAVLDFVEACESVKAELLASRQEDKTQHVEVTLHDCEP 343
Fly 344 TKPTGPLSDASTISNKNDASDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKREVLHHIYHQAEVHA 408
Fly 409 SGTPQTKSEPQSNLQVVPAISAETISLTSVNSTHLETLLVSIDGDEVMMIWNTNTGAHAGKNYSK 473
Fly 474 SKTAGKLNNVYWLNNHVIVSLSRHQLFFWSVEFERKMLRYKISKDKSHSCHLQDIV------SF- 531
Fly 532 -ACDSSKEMIW----LCRNN-------------------------RQIGMMNPKTGRMADFYGTV 566
Fly 567 AFGVRAMAECPDDMNKIALGCSDRRVAFFDISKLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFG 631
Fly 632 TFDGTVGILDVERMKVKTHLRTPHKKEVYSL-------------------VWQ---DHFIYFIVN 674
Fly 675 RVLGFFDLRKSKIEPTIVNCISRPSYLSIRDSFLFVGTDDGLLQIH-------ERDSGMEKSWSP 732
Fly 733 FIRQSALFARYVTDIAWCPL--DSNKFAVSGNDRSVYVMEFQ-PTERNWKTLHTFTANTEKASIT 794
Fly 795 SMRWSHTQKHLLLTFHIEGKVCLWN 819 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | 30/130 (23%) |
| WD40 | 80..>215 | CDD:225201 | 30/130 (23%) | ||
| WD40 repeat | 116..160 | CDD:293791 | 10/45 (22%) | ||
| WD40 repeat | 167..204 | CDD:293791 | 11/36 (31%) | ||
| WD40 | 434..821 | CDD:225201 | 70/455 (15%) | ||
| WD40 | 446..719 | CDD:295369 | 51/331 (15%) | ||
| WD40 | 613..874 | CDD:295369 | 42/239 (18%) | ||
| WD40 repeat | 617..654 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 659..691 | CDD:293791 | 3/53 (6%) | ||
| WD40 repeat | 693..732 | CDD:293791 | 9/45 (20%) | ||
| WD40 repeat | 744..785 | CDD:293791 | 8/43 (19%) | ||
| WD40 repeat | 793..831 | CDD:293791 | 6/27 (22%) | ||
| WD40 repeat | 838..861 | CDD:293791 | |||
| Apaf1 | NP_076469.1 | CARD_APAF1 | 7..92 | CDD:260034 | |
| AAA_16 | 126..245 | CDD:289934 | |||
| NB-ARC | 129..414 | CDD:279299 | |||
| WD40 | <598..685 | CDD:225201 | 2/6 (33%) | ||
| WD40 | 607..910 | CDD:238121 | 77/465 (17%) | ||
| WD 1-1 | 613..652 | ||||
| WD40 repeat | 623..655 | CDD:293791 | |||
| WD40 | 653..1038 | CDD:225201 | 103/643 (16%) | ||
| WD 1-2 | 655..694 | 6/20 (30%) | |||
| WD40 repeat | 661..697 | CDD:293791 | 7/23 (30%) | ||
| WD 1-3 | 697..738 | 11/48 (23%) | |||
| WD40 repeat | 702..740 | CDD:293791 | 11/45 (24%) | ||
| WD 1-4 | 741..780 | 14/75 (19%) | |||
| WD40 repeat | 747..789 | CDD:293791 | 18/155 (12%) | ||
| WD 1-5 | 796..837 | 21/129 (16%) | |||
| WD40 repeat | 801..837 | CDD:293791 | 18/124 (15%) | ||
| WD 1-6 | 838..877 | 9/52 (17%) | |||
| WD40 repeat | 843..882 | CDD:293791 | 7/52 (13%) | ||
| WD 1-7 | 880..910 | 5/29 (17%) | |||
| WD40 repeat | 885..909 | CDD:293791 | 4/23 (17%) | ||
| Interpropeller linker. /evidence=ECO:0000250 | 910..921 | 2/10 (20%) | |||
| WD 2-1 | 922..958 | 4/36 (11%) | |||
| WD 2-2 | 959..998 | 12/44 (27%) | |||
| WD40 | 961..1235 | CDD:238121 | 42/239 (18%) | ||
| WD40 | 961..>1235 | CDD:225201 | 42/239 (18%) | ||
| WD40 repeat | 964..1001 | CDD:293791 | 10/37 (27%) | ||
| WD 2-3 | 1001..1040 | 6/38 (16%) | |||
| WD40 repeat | 1006..1030 | CDD:293791 | 1/23 (4%) | ||
| WD 2-4 | 1042..1080 | 8/56 (14%) | |||
| WD40 repeat | 1048..1082 | CDD:293791 | 9/49 (18%) | ||
| WD 2-5 | 1083..1122 | 7/38 (18%) | |||
| WD40 repeat | 1089..1124 | CDD:293791 | 7/34 (21%) | ||
| WD 2-6 | 1125..1164 | 8/39 (21%) | |||
| WD40 repeat | 1130..1174 | CDD:293791 | 7/34 (21%) | ||
| WD 2-7 | 1176..1213 | ||||
| WD40 repeat | 1181..1203 | CDD:293791 | |||
| WD 2-8 | 1214..1249 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||