Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001366327.1 | Gene: | Wdsub1 / 72137 | MGIID: | 1919387 | Length: | 475 | Species: | Mus musculus |
Alignment Length: | 679 | Identity: | 115/679 - (16%) |
---|---|---|---|
Similarity: | 200/679 - (29%) | Gaps: | 307/679 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 570 VRAMAECPDDMNKIALG------CS-DRRVAFFDISKLTTSCLPIDSV-YVSSNVYCLAWSPNCL 626
Fly 627 ELAFGTFDGTVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPTI 691
Fly 692 VNCISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEKSWSP---------FIRQSALFARYVTDI 747
Fly 748 AWCPLDSNKFAV--SGNDRSVYVMEFQPTERNWKTLHTFTANTEKA---SITSMRWSH------- 800
Fly 801 -TQKHLLLTFHIEGKVCLWNCNAPEKPPLTITYHCPMWCGMFLPTNENIIMCSGKALSVELIDIK 864
Fly 865 DALEGDEKSICPKVDALLNVKWASKSLTQPYAPVLTAAEKKRQRRDQRKAAAKLEVDVANKDQKK 929
Fly 930 IQESVTAVIDNPTNDKCTQETPVEEMLEALSLDKEQNNRSAKECPKCKEQSPDSFTHSRTCLYLT 994
Fly 995 QKELNKSALEKLAIVLTEDSAKIDKSVLISKLFSSKVMAKELIATELTNLKHSNTKDIAPLCLAM 1059
Fly 1060 STFKLREELEQHIANKTLTERHVSLAPSVSFTLWQ----DCCRAYA-----KQMEEKGYIMHAAT 1115
Fly 1116 YLFSQGMQSEAIKLFLANEYYKEALVHARICLPATDPLIKTV-----INNWLEHLEGTGNFAAAA 1175
Fly 1176 L----ICVLDNEMLR-------GYSYLRK 1193 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
WD40 | 80..>215 | CDD:225201 | |||
WD40 repeat | 116..160 | CDD:293791 | |||
WD40 repeat | 167..204 | CDD:293791 | |||
WD40 | 434..821 | CDD:225201 | 55/280 (20%) | ||
WD40 | 446..719 | CDD:295369 | 31/156 (20%) | ||
WD40 | 613..874 | CDD:295369 | 54/282 (19%) | ||
WD40 repeat | 617..654 | CDD:293791 | 8/36 (22%) | ||
WD40 repeat | 659..691 | CDD:293791 | 4/31 (13%) | ||
WD40 repeat | 693..732 | CDD:293791 | 8/38 (21%) | ||
WD40 repeat | 744..785 | CDD:293791 | 10/42 (24%) | ||
WD40 repeat | 793..831 | CDD:293791 | 8/45 (18%) | ||
WD40 repeat | 838..861 | CDD:293791 | 2/22 (9%) | ||
Wdsub1 | NP_001366327.1 | WD40 | 4..308 | CDD:238121 | 88/553 (16%) |
WD 1 | 10..47 | 8/38 (21%) | |||
WD40 repeat | 16..52 | CDD:293791 | 7/37 (19%) | ||
WD 2 | 52..91 | 11/69 (16%) | |||
WD40 repeat | 57..93 | CDD:293791 | 11/66 (17%) | ||
WD 3 | 95..134 | 10/54 (19%) | |||
WD40 repeat | 101..136 | CDD:293791 | 9/50 (18%) | ||
WD 4 | 137..176 | 13/56 (23%) | |||
WD40 repeat | 143..177 | CDD:293791 | 11/51 (22%) | ||
WD 5 | 178..227 | 12/78 (15%) | |||
WD40 repeat | 183..235 | CDD:293791 | 14/82 (17%) | ||
WD 6 | 236..275 | 17/169 (10%) | |||
WD40 repeat | 241..264 | CDD:293791 | 11/124 (9%) | ||
WD40 repeat | 283..307 | CDD:293791 | 7/45 (16%) | ||
SAM_WDSUB1 | 327..398 | CDD:188904 | 14/71 (20%) | ||
U-box | 403..475 | CDD:398320 | 8/29 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |