DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and Wdr7

DIOPT Version :10

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_076465.1 Gene:Wdr7 / 66031 RGDID:619836 Length:1488 Species:Rattus norvegicus


Alignment Length:877 Identity:160/877 - (18%)
Similarity:292/877 - (33%) Gaps:309/877 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 LCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNKIAL-GCSDRRVAFFDISKL----- 600
            |.:.:|::.:..|.|   ..|||           |.:.::|:.: |.|..|::.::|:.:     
  Rat   316 LDQKDRELVICPPVT---RFFYG-----------CKEYLHKLLIQGDSSGRLSIWNIADIADKQE 366

  Fly   601 ------TTSCLPIDSVY-------------------------VSSNVYCLAWSPNCLELAFGTFD 634
                  ||:|:.:...:                         |:::||..|..    .|..|..|
  Rat   367 ANEGLKTTTCISLQDAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHG----RLVCGRED 427

  Fly   635 GTVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPTIVNCISRPS 699
            |::.|:...:..:...|:..|   :....|..|               |..:.....|.|:..|.
  Rat   428 GSIIIVPATQTAIVQLLQGEH---MLRRGWPPH---------------RTLRGHRNKVTCLLYPH 474

  Fly   700 YLSIR--DSFLFVGTDDGLLQIHERDSGMEKS------------WSPFIRQSALFARYVTDIAWC 750
            .:|.|  ..:|..|..|..:.|.:..||..|.            ..|....||.....|..:|  
  Rat   475 QVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVA-- 537

  Fly   751 PLDSNKFAVSGNDRSVYVMEFQPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKV 815
                       :|.||.::..    |..|.:  ..|:.....|..::|..:..:|::.. .:|.|
  Rat   538 -----------SDHSVGLLSL----REKKCI--MLASRHLFPIQVIKWRPSDDYLVVGC-TDGSV 584

  Fly   816 CLW--NCNAPEKPPLTITYHCPMWCGMFLPTNENIIMCSGKALSVELIDIKDALEGDEKSICPKV 878
            |:|  :..|.::..:.||                         :||:::..|      :::...|
  Rat   585 CVWQMDTGALDRCAMGIT-------------------------AVEILNACD------EAVPAAV 618

  Fly   879 DALLNVKWASKSLTQPYAPVLTAAEKKRQRRDQRKAAAKLEVDVANKDQKKIQESVTAVIDNPTN 943
            |          ||:.|       |...:|...:|..||     :.|....|:|...|.::.:..:
  Rat   619 D----------SLSHP-------AVNLKQAMTRRSLAA-----LKNMAHHKLQTLATNLLASEAS 661

  Fly   944 DK----------------CTQET---------PVEEMLEALSLDKEQNNRSAKECPKCKEQSPDS 983
            ||                .|..|         .||.::..|..::.....:|...|:..:::..|
  Rat   662 DKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGS 726

  Fly   984 -------FTHSRTCLYLTQ-KELNKSALEKLAIVLTEDSAKIDKSVLISKLFSSKVMAKELIATE 1040
                   .|..|..:...| ||..|..:::..:...||    ::.|:..:...|....:...:..
  Rat   727 SDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEED----EEEVMRQRREESDPEYRASKSKP 787

  Fly  1041 LTNLKHSNTKDIAPLCLA-MSTFKLREELEQHIANKTLTERHVSLAP--SVSFTLWQDCCRAYAK 1102
            ||.|:::.|.|.|.|.:: :..:.|.|.|::     ...:|...|.|  :|||.|   ..|....
  Rat   788 LTLLEYNLTMDTAKLFMSCLHAWGLNEVLDE-----VCLDRLGMLKPHCTVSFGL---LSRGGHM 844

  Fly  1103 QMEEKGYIMHA----------------------ATYLFSQGMQSEAIK--LFLAN---------- 1133
            .:...||...|                      .||..|:.:.::.:.  :.|||          
  Rat   845 SLMLPGYNQAAGKLLQAKAEAGRKGPATESVGKGTYTVSRAVTTQHLLSIISLANTLMSMTNATF 909

  Fly  1134 --EYYKEA-----------LVHARICLPATDPLIKTVI---------NNWLEHLEGTGNFAAAAL 1176
              ::.|:.           |..||...||:..:::..|         .:..:| .|:.:.:.|..
  Rat   910 IGDHMKKGPTRPPRPGTPDLSKARDSPPASSNIVQGQIKQAAAPVSARSAADH-SGSASASPALR 973

  Fly  1177 ICVLDNEMLRGYSYL--------------------------RKYRNCTPEIAD-----LMDQIKR 1210
            .|.|.||   |:|.|                          |::::...|:.:     |:.:::|
  Rat   974 TCFLVNE---GWSQLAAMHCVMLPDLLGLGKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRR 1035

  Fly  1211 IGQLG--GVLDGCAPNEP------IHNGSTAE 1234
            |.|.|  ..:|..||..|      |..|.|||
  Rat  1036 IEQAGRKETIDTWAPYLPQYMDHVISPGVTAE 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 446..719 CDD:475233 38/215 (18%)
WD40 613..874 CDD:475233 49/276 (18%)
WD40 repeat 617..654 CDD:293791 8/36 (22%)
WD40 repeat 659..691 CDD:293791 3/31 (10%)
WD40 repeat 693..732 CDD:293791 11/52 (21%)
WD40 repeat 744..785 CDD:293791 7/40 (18%)
WD40 repeat 793..831 CDD:293791 8/39 (21%)
WD40 repeat 838..861 CDD:293791 2/22 (9%)
Wdr7NP_076465.1 WD40 <16..189 CDD:441893
WD 1 17..56
WD40 repeat 22..62 CDD:293791
WD 2 62..104
WD40 repeat 68..109 CDD:293791
WD40 repeat 114..153 CDD:293791
WD 3 156..199
WD40 repeat 162..208 CDD:293791
WD 4 324..366 11/55 (20%)
WD40 repeat 393..461 CDD:293791 14/89 (16%)
WD 5 404..443 9/42 (21%)
WD40 407..>594 CDD:475233 44/228 (19%)
WD 6 462..507 12/44 (27%)
WD40 repeat 468..522 CDD:293791 11/53 (21%)
WD 7 558..597 8/39 (21%)
WD40 repeat 563..589 CDD:293791 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 761..781 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 911..947 6/35 (17%)
WD 8 1349..1388
WD40 repeat 1354..1390 CDD:293791
WD40 <1364..>1424 CDD:441893
WD 9 1390..1430
Blue background indicates that the domain is not in the aligned region.

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