| Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_076465.1 | Gene: | Wdr7 / 66031 | RGDID: | 619836 | Length: | 1488 | Species: | Rattus norvegicus |
| Alignment Length: | 877 | Identity: | 160/877 - (18%) |
|---|---|---|---|
| Similarity: | 292/877 - (33%) | Gaps: | 309/877 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 542 LCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNKIAL-GCSDRRVAFFDISKL----- 600
Fly 601 ------TTSCLPIDSVY-------------------------VSSNVYCLAWSPNCLELAFGTFD 634
Fly 635 GTVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPTIVNCISRPS 699
Fly 700 YLSIR--DSFLFVGTDDGLLQIHERDSGMEKS------------WSPFIRQSALFARYVTDIAWC 750
Fly 751 PLDSNKFAVSGNDRSVYVMEFQPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKV 815
Fly 816 CLW--NCNAPEKPPLTITYHCPMWCGMFLPTNENIIMCSGKALSVELIDIKDALEGDEKSICPKV 878
Fly 879 DALLNVKWASKSLTQPYAPVLTAAEKKRQRRDQRKAAAKLEVDVANKDQKKIQESVTAVIDNPTN 943
Fly 944 DK----------------CTQET---------PVEEMLEALSLDKEQNNRSAKECPKCKEQSPDS 983
Fly 984 -------FTHSRTCLYLTQ-KELNKSALEKLAIVLTEDSAKIDKSVLISKLFSSKVMAKELIATE 1040
Fly 1041 LTNLKHSNTKDIAPLCLA-MSTFKLREELEQHIANKTLTERHVSLAP--SVSFTLWQDCCRAYAK 1102
Fly 1103 QMEEKGYIMHA----------------------ATYLFSQGMQSEAIK--LFLAN---------- 1133
Fly 1134 --EYYKEA-----------LVHARICLPATDPLIKTVI---------NNWLEHLEGTGNFAAAAL 1176
Fly 1177 ICVLDNEMLRGYSYL--------------------------RKYRNCTPEIAD-----LMDQIKR 1210
Fly 1211 IGQLG--GVLDGCAPNEP------IHNGSTAE 1234 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
| WD40 | 80..>215 | CDD:225201 | |||
| WD40 repeat | 116..160 | CDD:293791 | |||
| WD40 repeat | 167..204 | CDD:293791 | |||
| WD40 | 434..821 | CDD:225201 | 60/331 (18%) | ||
| WD40 | 446..719 | CDD:295369 | 38/215 (18%) | ||
| WD40 | 613..874 | CDD:295369 | 49/276 (18%) | ||
| WD40 repeat | 617..654 | CDD:293791 | 8/36 (22%) | ||
| WD40 repeat | 659..691 | CDD:293791 | 3/31 (10%) | ||
| WD40 repeat | 693..732 | CDD:293791 | 11/52 (21%) | ||
| WD40 repeat | 744..785 | CDD:293791 | 7/40 (18%) | ||
| WD40 repeat | 793..831 | CDD:293791 | 8/39 (21%) | ||
| WD40 repeat | 838..861 | CDD:293791 | 2/22 (9%) | ||
| Wdr7 | NP_076465.1 | WD 1 | 17..56 | ||
| WD40 | <19..199 | CDD:225201 | |||
| WD40 | <19..102 | CDD:295369 | |||
| WD40 repeat | 22..62 | CDD:293791 | |||
| WD 2 | 62..104 | ||||
| WD40 repeat | 68..109 | CDD:293791 | |||
| WD40 repeat | 114..153 | CDD:293791 | |||
| WD 3 | 156..199 | ||||
| WD40 repeat | 162..208 | CDD:293791 | |||
| WD 4 | 324..366 | 11/55 (20%) | |||
| WD40 | 341..>592 | CDD:225201 | 52/292 (18%) | ||
| WD40 repeat | 393..461 | CDD:293791 | 14/89 (16%) | ||
| WD 5 | 404..443 | 9/42 (21%) | |||
| WD40 | 407..>594 | CDD:295369 | 44/228 (19%) | ||
| WD 6 | 462..507 | 12/44 (27%) | |||
| WD40 repeat | 468..522 | CDD:293791 | 11/53 (21%) | ||
| WD 7 | 558..597 | 8/39 (21%) | |||
| WD40 repeat | 563..589 | CDD:293791 | 7/26 (27%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 761..781 | 4/23 (17%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 911..947 | 6/35 (17%) | |||
| WD 8 | 1349..1388 | ||||
| WD40 repeat | 1354..1390 | CDD:293791 | |||
| WD40 | <1355..1424 | CDD:295369 | |||
| WD40 | <1363..>1482 | CDD:225201 | |||
| WD 9 | 1390..1430 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||