DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and Wdr72

DIOPT Version :9

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001028672.2 Gene:Wdr72 / 546144 MGIID:3583957 Length:1114 Species:Mus musculus


Alignment Length:699 Identity:136/699 - (19%)
Similarity:224/699 - (32%) Gaps:272/699 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 DSVYVSSNVYCLAWSPNCLELAFGTFDGTV-----------GILDVERMKVKTHLRT---PHKKE 658
            |.|.:::.:....:.||..:|..|..|||:           |:|:.:.:...:...|   .|.:.
Mouse   410 DEVGMTATITSSEYIPNLDKLICGCEDGTIFITKALNAAKAGLLEGDSLLKDSPCHTLLRGHHQS 474

  Fly   659 VYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPTIVNCISRPSYLSIRD---------SFLFVGTDD 714
            |.||::..:.               .||::.:.:....|.||:.:.|         .||..|...
Mouse   475 VTSLLYPHNL---------------ASKLDQSWMVSGDRGSYVILWDIFTEEILHTFFLEAGPVT 524

  Fly   715 GLLQIHERDSGMEKSWSPFI----------------RQSALFARY----VTDIAWCPLDSNKFAV 759
            .||...|   .:::|....:                |:..|.||.    |..|.|.|:: |...|
Mouse   525 RLLMSPE---NLKRSDGQILCCVCGDHSVALLHLEGRRCLLRARKHLFPVRMIRWHPVE-NFLIV 585

  Fly   760 SGNDRSVYVMEFQ--PTERNWKTLHTFTANTEKASI---------------TSMRWSHTQKHLLL 807
            ...|.|||:.|.:  ..||:        ...|:|.|               |....|.|.||.  
Mouse   586 GCTDDSVYIWEIETGTLERH--------ETGERARIILNCGDDAQLIRSEPTLSVASETHKHK-- 640

  Fly   808 TFHIEGKVCLWNCNAPEK---PPLTITYHCPMWCGMFLPTNENIIMCSGK----ALSVELIDIKD 865
              .||.|..  |.:.|..   |.:.:...|.:.....:|...|::....|    ...|.|.|:::
Mouse   641 --SIEQKSS--NSHQPGPVPCPSVQLESSCKVADASSVPRPFNVLPVKTKWSHIGFHVLLFDLEN 701

  Fly   866 ALEGDEKSICPKVDALLNVKWASKSLTQPYAPV---------------LTAAEKKRQRRDQRKAA 915
            .:|            ||        |..|.:.|               .:..|||.....:.||:
Mouse   702 LVE------------LL--------LPTPLSDVDPSGSFYGGDILRRAKSTVEKKTLTIRRNKAS 746

  Fly   916 -AKLEVDVANKDQKKIQESVTAVIDNPTNDKCTQETPVEEMLEALSLDKEQNN--RSAKECPKCK 977
             :.|:.:...|               |:.|...       :.::.|...|:||  :..|:....|
Mouse   747 CSSLQTEAQAK---------------PSGDSLV-------LGDSTSKFSEENNGIKRQKKMKSSK 789

  Fly   978 EQSPDSFTHSRTCLYLTQKELNKSALEKLAIVLTEDSAKIDKSVLI--SKLFSSKVMAKELIATE 1040
            :..|                              :...|:|.|:.|  :|||.|.:         
Mouse   790 KAHP------------------------------KPPRKVDASLTIDMAKLFLSCI--------- 815

  Fly  1041 LTNLKHSNTKDIAPLCLA-MSTFKLREELEQHIA-NKTLTERHVSLAPSVSFTL----WQDCCRA 1099
               |.....||:..||.. :|..||:..:...:| |:.|            |:|    |..|   
Mouse   816 ---LPWGVDKDLDSLCTRHLSILKLQGPVSLGLASNEDL------------FSLMLPGWDAC--- 862

  Fly  1100 YAKQMEEKGYI------------MHAATYLFSQGM------------QSEAI-----KLFLANEY 1135
             :.:|:|...:            .:.||.|...|:            ||:||     :|||.|:.
Mouse   863 -STEMKEYSGVNLCSRKVLDLSSKYTATLLHQTGIPRGLESHCDSVQQSDAIVYLLSRLFLVNKL 926

  Fly  1136 --------------YKEALVHARICLPATDPLIKTVINNWLEHLEGTGN 1170
                          :|...||::...|.:|.|   .|:::..|.:..||
Mouse   927 VNMPLDLACEIDRPFKMETVHSKARFPGSDIL---NISSFYGHPKNGGN 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 <80..>215 CDD:295369
WD40 80..>215 CDD:225201
WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 434..821 CDD:225201 58/272 (21%)
WD40 446..719 CDD:295369 27/133 (20%)
WD40 613..874 CDD:295369 66/327 (20%)
WD40 repeat 617..654 CDD:293791 10/50 (20%)
WD40 repeat 659..691 CDD:293791 5/31 (16%)
WD40 repeat 693..732 CDD:293791 11/47 (23%)
WD40 repeat 744..785 CDD:293791 13/42 (31%)
WD40 repeat 793..831 CDD:293791 12/55 (22%)
WD40 repeat 838..861 CDD:293791 4/26 (15%)
Wdr72NP_001028672.2 WD40 14..>191 CDD:392136
WD 1. /evidence=ECO:0000255 15..54
WD40 repeat 20..60 CDD:293791
WD 2. /evidence=ECO:0000255 60..102
WD40 repeat 66..107 CDD:293791
WD40 repeat 112..151 CDD:293791
WD40 repeat 160..206 CDD:293791
WD 3. /evidence=ECO:0000255 160..197
WD 4. /evidence=ECO:0000255 327..373
WD 5. /evidence=ECO:0000255 413..452 7/38 (18%)
WD40 418..>606 CDD:392136 44/214 (21%)
WD40 repeat 419..470 CDD:293791 10/50 (20%)
WD 6. /evidence=ECO:0000255 470..515 10/59 (17%)
WD40 repeat 475..516 CDD:293791 9/55 (16%)
WD 7. /evidence=ECO:0000255 566..605 12/39 (31%)
WD40 repeat 571..597 CDD:293791 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..658 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 749..798 11/100 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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