DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and wdr32

DIOPT Version :9

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_998111.2 Gene:wdr32 / 405882 ZFINID:ZDB-GENE-040426-2314 Length:508 Species:Danio rerio


Alignment Length:608 Identity:107/608 - (17%)
Similarity:185/608 - (30%) Gaps:251/608 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 ASGTPQTKSEPQSNL-------------------QVVPAISAETISLTSV-NSTHLETLLVSIDG 452
            :||.|....||:::|                   ...||....|...... .|:..|   |:.||
Zfish     2 SSGHPSDNEEPRADLLREEEEEEEEEEDSDEDRGSTRPASPQATRECAGTQGSSRPE---VTADG 63

  Fly   453 DEVMMIWNTNTGAHAGKNYSKSKTAGKLNNVY-WLNNHVI-----VSLSRHQLFFWSVEFERKML 511
                     .||:.:|   |..:.:|..:::: |:....|     |..:|...        |.|.
Zfish    64 ---------GTGSASG---SGCRGSGACDSLFSWICRRKIRRGPYVDPARDHF--------RTMT 108

  Fly   512 R-YKISKDKSHSCHLQ----------------DIVSFACDSSKEMIWLCRNNRQIGMMNPKTGRM 559
            | |......:.|.:|.                .:::.||:.::.:::...::|.|..:       
Zfish   109 RLYSSMSPAADSVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPVSSRHIKTL------- 166

  Fly   560 ADFYGTVAFGVRAMAECPDDM----NKIALGCS-DRRVAFFDISKLTTSCLPIDSVYVSSNVYCL 619
                      |.|..:|.:::    |::...|| |..:|.:|:.||.:....:..  .:|.|..:
Zfish   167 ----------VEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNSKVCSLHG--HASWVKNI 219

  Fly   620 AWSPNCLELAFGTFDGTVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLR- 683
            .:..:...|....|||.|...|..|.   |....||||                     ||..| 
Zfish   220 EYDTHTRLLVTSGFDGNVITWDTNRF---TEDGCPHKK---------------------FFHTRY 260

  Fly   684 --KSKIEPTIVNCISRPSYLSIRDSFLFVGTDDG-LLQIHERDSGMEKSWSPFIRQSALFARYVT 745
              :.::.|   :|           |.:.:.|..| ||.:|:.|          :.||.....|..
Zfish   261 LMRMRLTP---DC-----------SKMLISTSSGYLLILHDLD----------LTQSLEVGSYRI 301

  Fly   746 DIAWCPLDSNKFAVSGN-------------------------------------DRSVYVMEFQP 773
            ..|..|..|.:.:.:|:                                     ||...:...|.
Zfish   302 LRARRPPLSTEGSSAGSRSGGPRHTIDNKNHPHREGLSPRNSLEVLTPEIPGERDRGNCITSLQL 366

  Fly   774 TERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKVCLWNC------NAPEKPP----- 827
            ..:.|.||...::|.:...                         |.|      .||.:||     
Zfish   367 HPKGWATLLRCSSNMDDQE-------------------------WTCVYEFQEGAPPRPPVSPRC 406

  Fly   828 -LTITYH--------------CPMWCGMFLPTNENIIMCSGKALSV----------ELID---IK 864
             |.:|::              |      |.|  :..::||.....|          ||:|   ::
Zfish   407 SLRLTHYIEEANVGRGYIKELC------FSP--DGRLICSPYGYGVRLLAFDENCAELVDCMPVR 463

  Fly   865 DALEGDEKSICPKVDALLNVKWA 887
            .|...:.:||....|.:|..|::
Zfish   464 TAQLREVRSIYSHSDVVLTSKFS 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 <80..>215 CDD:295369
WD40 80..>215 CDD:225201
WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 434..821 CDD:225201 77/462 (17%)
WD40 446..719 CDD:295369 57/304 (19%)
WD40 613..874 CDD:295369 58/340 (17%)
WD40 repeat 617..654 CDD:293791 8/36 (22%)
WD40 repeat 659..691 CDD:293791 4/34 (12%)
WD40 repeat 693..732 CDD:293791 8/39 (21%)
WD40 repeat 744..785 CDD:293791 10/77 (13%)
WD40 repeat 793..831 CDD:293791 7/49 (14%)
WD40 repeat 838..861 CDD:293791 6/32 (19%)
wdr32NP_998111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 18/87 (21%)
WD 1 126..165 4/38 (11%)
WD40 <129..279 CDD:295369 36/206 (17%)
WD40 <131..>294 CDD:225201 42/229 (18%)
WD40 repeat 132..167 CDD:293791 4/51 (8%)
WD 2 169..207 10/37 (27%)
WD40 repeat 174..210 CDD:293791 8/35 (23%)
WD 3 211..250 10/43 (23%)
WD40 repeat 216..242 CDD:293791 6/25 (24%)
WD 4 256..295 13/62 (21%)
WD40 repeat 261..288 CDD:293791 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..343 3/35 (9%)
WD 5 356..396 9/64 (14%)
WD 6 419..457 7/45 (16%)
WD 7 475..508 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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