Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_725799.1 | Gene: | CG30116 / 37126 | FlyBaseID: | FBgn0028496 | Length: | 1922 | Species: | Drosophila melanogaster |
Alignment Length: | 1073 | Identity: | 180/1073 - (16%) |
---|---|---|---|
Similarity: | 329/1073 - (30%) | Gaps: | 408/1073 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 RDVRVVHHT--------------TNSVLMSYLA--------NGNILSMDASDLVIYC-------- 147
Fly 148 ------------------VASNTYCRRSTFISPRNHQLTMVRCSPYNDNLFAVGTAMGNVLVCDL 194
Fly 195 RKMNIVYKFHGHKAPI-CGLAWREVPAAEDEKTNNLALSAEEWRSRNGGQEEKPKTKPPPLTKSK 258
Fly 259 AAESDDPFDIYNFDHLEYEFGAPIAERRRKSSEDCGGEFVGLEKPAGAAVLDFVEACESVKAELL 323
Fly 324 ASRQEDKTQHVEVTLHDCEPTKPTGPLSDASTISNKNDASDSTEGSLEVIQYSSSSDDAV-IVDG 387
Fly 388 EAAKPKREVLHHIYHQAEVHASGTPQTKSEPQSNLQVVPAISA-------ETI------SLTSVN 439
Fly 440 STHLETLLVSIDGDEVMMIWNT---------NTGAHAGKNYSKSKTAGKLNNVYWLNNHVIVSLS 495
Fly 496 RHQLFFWSVEFERKMLRYKISKDKSHSCHLQDIVSFACDSSKEMIWLCRNNRQIGMMNPKTGRMA 560
Fly 561 --------DFYGTVA------FGVR----------------------AMAE-----------CPD 578
Fly 579 ---DMNKIALGCSDRRVAFFDISKLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFGTFDGTVGIL 640
Fly 641 DVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLG-FFDLRKSKIEPTIVNCISRPSYLSIR 704
Fly 705 DSFLFVGTD-DGLLQIHERDSG--MEKSWSPFIRQSALFARYVTDIAWCPLDSNKFAVSGN-DRS 765
Fly 766 VYVMEFQPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEG----KVCLWNCNAPEKP 826
Fly 827 PLTITYHCPMWCGMFLPTNENIIMCSGKALSVELIDIKDALEGDE-KSICPKVDALLNVKWASKS 890
Fly 891 LTQPYAPVLTAAEKK-----RQRRDQRKAAAKLEVDVANKD-QKKIQESVTAVIDN---PTNDKC 946
Fly 947 TQETPVEEM---------LEALSLDKEQNNRSAKECPKCKEQSPDSFTHSRTCLYLTQKELNKSA 1002
Fly 1003 LEKLAIVLTEDSAKIDKSVLISKLFSSKVMAKE 1035 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | 26/150 (17%) |
WD40 | 80..>215 | CDD:225201 | 26/150 (17%) | ||
WD40 repeat | 116..160 | CDD:293791 | 13/91 (14%) | ||
WD40 repeat | 167..204 | CDD:293791 | 4/36 (11%) | ||
WD40 | 434..821 | CDD:225201 | 82/454 (18%) | ||
WD40 | 446..719 | CDD:295369 | 60/333 (18%) | ||
WD40 | 613..874 | CDD:295369 | 52/270 (19%) | ||
WD40 repeat | 617..654 | CDD:293791 | 9/36 (25%) | ||
WD40 repeat | 659..691 | CDD:293791 | 6/32 (19%) | ||
WD40 repeat | 693..732 | CDD:293791 | 8/41 (20%) | ||
WD40 repeat | 744..785 | CDD:293791 | 9/41 (22%) | ||
WD40 repeat | 793..831 | CDD:293791 | 7/41 (17%) | ||
WD40 repeat | 838..861 | CDD:293791 | 4/22 (18%) | ||
CG30116 | NP_725799.1 | AAA_16 | 359..505 | CDD:289934 | |
WD40 repeat | 901..937 | CDD:293791 | 7/48 (15%) | ||
WD40 | 933..1282 | CDD:238121 | 88/546 (16%) | ||
WD40 repeat | 942..982 | CDD:293791 | 14/122 (11%) | ||
WD40 repeat | 988..1024 | CDD:293791 | 8/47 (17%) | ||
WD40 | 1022..1484 | CDD:225201 | 102/591 (17%) | ||
WD40 repeat | 1029..1064 | CDD:293791 | 7/34 (21%) | ||
WD40 repeat | 1071..1106 | CDD:293791 | 8/47 (17%) | ||
WD40 repeat | 1112..1147 | CDD:293791 | 8/41 (20%) | ||
WD40 repeat | 1216..1252 | CDD:293791 | 9/36 (25%) | ||
WD40 | 1248..1502 | CDD:238121 | 58/329 (18%) | ||
WD40 repeat | 1258..1294 | CDD:293791 | 14/68 (21%) | ||
WD40 repeat | 1299..1335 | CDD:293791 | 8/42 (19%) | ||
WD40 repeat | 1340..1374 | CDD:293791 | 9/46 (20%) | ||
WD40 repeat | 1379..1415 | CDD:293791 | 7/40 (18%) | ||
WD40 repeat | 1421..1458 | CDD:293791 | 9/39 (23%) | ||
WD40 repeat | 1464..1488 | CDD:293791 | 4/28 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |