DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and Wdr17

DIOPT Version :9

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_008769471.1 Gene:Wdr17 / 364653 RGDID:1590843 Length:1314 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 <80..>215 CDD:295369
WD40 80..>215 CDD:225201
WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 434..821 CDD:225201
WD40 446..719 CDD:295369
WD40 613..874 CDD:295369
WD40 repeat 617..654 CDD:293791
WD40 repeat 659..691 CDD:293791
WD40 repeat 693..732 CDD:293791
WD40 repeat 744..785 CDD:293791
WD40 repeat 793..831 CDD:293791
WD40 repeat 838..861 CDD:293791
Wdr17XP_008769471.1 WD40 <44..444 CDD:225201
WD40 <74..298 CDD:295369
WD40 repeat 86..124 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..218 CDD:293791
WD40 repeat 226..263 CDD:293791
WD40 repeat 271..297 CDD:293791
WD40 repeat 357..391 CDD:293791
WD40 <373..682 CDD:225201
WD40 391..681 CDD:238121
WD40 repeat 397..434 CDD:293791
WD40 repeat 439..476 CDD:293791
WD40 repeat 484..517 CDD:293791
WD40 repeat 524..563 CDD:293791
WD40 repeat 569..606 CDD:293791
WD40 repeat 612..637 CDD:293791
WD40 repeat 655..682 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326439at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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