Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020914.1 | Gene: | Wdr61 / 363064 | RGDID: | 1308228 | Length: | 305 | Species: | Rattus norvegicus |
Alignment Length: | 363 | Identity: | 78/363 - (21%) |
---|---|---|---|
Similarity: | 122/363 - (33%) | Gaps: | 153/363 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 459 WNTNTGAHAGKNYSKSKTAGKLNNVY----WLNNHVIV--SLSRHQLFFWSVEFERKMLRYKISK 517
Fly 518 DKSHSCHLQDIVSFACDSSKEMIWLCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAECPDDMNK 582
Fly 583 IALGCSDRRVAFFDISKLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFGTFDGTVGILDVERMKV 647
Fly 648 KTHLRTPHKKEVYSLVWQDHFIYFI-------------VNRVLGFFDLRKSKIEPTIVNCISRPS 699
Fly 700 YLSIR------DSFLFV-GTDDGLLQIHERDSGMEKSWSPFIRQSAL------FARYVTDIAWCP 751
Fly 752 LDSNKFAVSGNDRSVYVMEFQPTERNWKT-----LHTF 784 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
WD40 | 80..>215 | CDD:225201 | |||
WD40 repeat | 116..160 | CDD:293791 | |||
WD40 repeat | 167..204 | CDD:293791 | |||
WD40 | 434..821 | CDD:225201 | 78/363 (21%) | ||
WD40 | 446..719 | CDD:295369 | 60/285 (21%) | ||
WD40 | 613..874 | CDD:295369 | 53/203 (26%) | ||
WD40 repeat | 617..654 | CDD:293791 | 13/36 (36%) | ||
WD40 repeat | 659..691 | CDD:293791 | 9/44 (20%) | ||
WD40 repeat | 693..732 | CDD:293791 | 10/45 (22%) | ||
WD40 repeat | 744..785 | CDD:293791 | 15/46 (33%) | ||
WD40 repeat | 793..831 | CDD:293791 | |||
WD40 repeat | 838..861 | CDD:293791 | |||
Wdr61 | NP_001020914.1 | WD40 | 13..302 | CDD:238121 | 78/363 (21%) |
WD 1 | 14..57 | 7/37 (19%) | |||
WD40 repeat | 19..62 | CDD:293791 | 9/42 (21%) | ||
WD 2 | 62..101 | 12/85 (14%) | |||
WD40 repeat | 68..105 | CDD:293791 | 10/83 (12%) | ||
WD 3 | 104..143 | 19/75 (25%) | |||
WD40 repeat | 110..146 | CDD:293791 | 19/46 (41%) | ||
WD 4 | 146..187 | 7/45 (16%) | |||
WD40 repeat | 152..188 | CDD:293791 | 5/40 (13%) | ||
WD 5 | 188..227 | 11/50 (22%) | |||
WD40 repeat | 193..229 | CDD:293791 | 11/47 (23%) | ||
WD 6 | 230..269 | 13/48 (27%) | |||
WD40 repeat | 236..271 | CDD:293791 | 14/45 (31%) | ||
WD 7 | 272..305 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |