| Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001014201.1 | Gene: | Wdsub1 / 362137 | RGDID: | 1359296 | Length: | 476 | Species: | Rattus norvegicus |
| Alignment Length: | 381 | Identity: | 77/381 - (20%) |
|---|---|---|---|
| Similarity: | 121/381 - (31%) | Gaps: | 121/381 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 314 ACESVKAELLASRQEDKT------------QHVEVTLH----DCEPTKPTGPLSDASTISNKNDA 362
Fly 363 SDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKREVLHHIYHQAEVHASGTPQTKSEPQSNLQVVPA 427
Fly 428 ISAETISLTSVNSTHLETLLVSIDGDEVMMIWNTNTGAHAGKNY-------------SKSKTAGK 479
Fly 480 L-------NNVYWLNN-HVIVSLSRHQLFFWSVEFERKMLRYKISKDKSHSCHLQDIVSFACDSS 536
Fly 537 KEM-IWLCRNNRQIGMMNPKTGRMADFYGTVAFGVRAMAEC--PDDMNKIALGCSDRRVAFFDIS 598
Fly 599 KLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFGTFDGTVGILDVERMKVKTHLRTP 654 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | |
| WD40 | 80..>215 | CDD:225201 | |||
| WD40 repeat | 116..160 | CDD:293791 | |||
| WD40 repeat | 167..204 | CDD:293791 | |||
| WD40 | 434..821 | CDD:225201 | 56/245 (23%) | ||
| WD40 | 446..719 | CDD:295369 | 53/233 (23%) | ||
| WD40 | 613..874 | CDD:295369 | 15/42 (36%) | ||
| WD40 repeat | 617..654 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 659..691 | CDD:293791 | |||
| WD40 repeat | 693..732 | CDD:293791 | |||
| WD40 repeat | 744..785 | CDD:293791 | |||
| WD40 repeat | 793..831 | CDD:293791 | |||
| WD40 repeat | 838..861 | CDD:293791 | |||
| Wdsub1 | NP_001014201.1 | WD40 | 4..309 | CDD:238121 | 74/366 (20%) |
| WD 1 | 10..47 | 7/30 (23%) | |||
| WD40 repeat | 16..52 | CDD:293791 | 8/35 (23%) | ||
| WD 2 | 52..91 | 11/49 (22%) | |||
| WD40 repeat | 57..93 | CDD:293791 | 10/46 (22%) | ||
| WD 3 | 95..134 | 14/84 (17%) | |||
| WD40 repeat | 101..136 | CDD:293791 | 13/80 (16%) | ||
| WD 4 | 137..176 | 4/38 (11%) | |||
| WD40 repeat | 143..177 | CDD:293791 | 5/33 (15%) | ||
| WD 5 | 178..228 | 12/63 (19%) | |||
| WD40 repeat | 183..236 | CDD:293791 | 11/66 (17%) | ||
| WD 6 | 237..276 | 11/40 (28%) | |||
| WD40 repeat | 242..266 | CDD:293791 | 6/23 (26%) | ||
| WD 7 | 279..318 | 15/45 (33%) | |||
| WD40 repeat | 284..308 | CDD:293791 | 11/24 (46%) | ||
| SAM_WDSUB1 | 328..399 | CDD:188904 | |||
| U-box | 404..476 | CDD:398320 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||