Protein Alignment rig and LOC3290403

DIOPT Version :10

• Sequence 1: NP_611499.3
• Gene: rig / 37335
• FlyBaseID: FBgn0250850
• Length: 1235
• Species: Drosophila melanogaster
• Sequence 2: XP_564611.3
• Gene: LOC3290403 / 3290403
• VectorBaseID: AGAMI1_012072
• Length: 336
• Species: Anopheles gambiae
• Alignment Length: 337
• Identity: 62/337 - (18%)
• Similarity: 132/337 - (39%)
• Gaps: 86/337 - (25%)

  Fly   502 WSVEFERKMLRYKISKDKSHSCHLQDIVSFACDSSKEMIWLCRNNRQIGMMNPKTGRMADFYGTV 566
            |.|..:|...:.:    .:.:.|...:||....:|.|:|.....:..:.:...:||::
Mosquito    72 WDVLPDRSKFKLR----NTFTGHSLGVVSVDVSTSGEVIASSSLDSSLCIWKAETGQL------- 125

  Fly   567 AFGVRAMAECPDDMNKIALGCSDRRVAFFDISKLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFG 631
                         ||:|::|                   |:|       ::.:|:||....:..|
Mosquito   126 -------------MNQISVG-------------------PVD-------LWTVAFSPCDKYIISG 151

  Fly   632 TFDGTVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYF---IVNRVLGFFDLRKSKIEPTIVN 693
            :.:|.:.:..||..|.:..|...:.|...|:.:.....|.   .::.::..||:...|:..|:..
Mosquito   152 SHEGKISLYSVETGKAEQVLDPQNGKFTLSIAYSPDGKYIASGAIDGIINIFDVAAGKVAQTLEG 216

  Fly   694 --------CISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDIAWC 750
                    |.|..|.:      |...:|||.::::      :.:.|..:...:..|.:|..:::.
Mosquito   217 HAMSVRSLCFSPDSQM------LLTASDDGHMKLY------DVAHSDVVGTLSGHASWVLSVSFS 269

  Fly   751 PLDSNKFAVSGNDRSVYVMEFQPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKV 815
            . |...||.|.:|::|.:  :...||  :.|||||.:.::  :..:|:|....:::   .:....
Mosquito   270 G-DGKNFASSSSDKTVKI--WNVAER--QCLHTFTEHADQ--VWGVRYSPDSANVI---SVSEDK 324

  Fly   816 CLWNCNAPEKPP 827
            |:   |..:.||
Mosquito   325 CI---NMYDCPP 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rig	NP_611499.3	WD40 repeat	116..160	CDD:293791
		WD40 repeat	167..204	CDD:293791
		WD40	446..719	CDD:475233	40/227 (18%)
		WD40	613..874	CDD:475233	45/226 (20%)
		WD40 repeat	617..654	CDD:293791	9/36 (25%)
		WD40 repeat	659..691	CDD:293791	5/34 (15%)
		WD40 repeat	693..732	CDD:293791	7/46 (15%)
		WD40 repeat	744..785	CDD:293791	12/40 (30%)
		WD40 repeat	793..831	CDD:293791	6/35 (17%)
		WD40 repeat	838..861	CDD:293791
LOC3290403	XP_564611.3	WD40	<59..324	CDD:441893	58/323 (18%)
		WD40 repeat	95..133	CDD:293791	11/76 (14%)
		WD40 repeat	136..172	CDD:293791	8/35 (23%)
		WD40 repeat	180..215	CDD:293791	6/34 (18%)
		WD40 repeat	221..257	CDD:293791	8/47 (17%)
		WD40 repeat	263..299	CDD:293791	12/40 (30%)
		WD40 repeat	305..329	CDD:293791	4/29 (14%)