DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rig and Tep1

DIOPT Version :10

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_033377.1 Gene:Tep1 / 21745 MGIID:109573 Length:2629 Species:Mus musculus


Alignment Length:1057 Identity:186/1057 - (17%)
Similarity:332/1057 - (31%) Gaps:307/1057 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SAPPA-----NGEQPQVVTMSTRINILALD--------VSPMWGLGNGGPTKPFAIVGD------ 85
            |:|.|     ||::..|.|.|..|.:|.|.        ||...|:.:      ||.:.|      
Mouse  1684 SSPTAVAFSPNGQRAAVGTASGTIYLLNLKTWQEEKAVVSGCDGISS------FAFLSDTALFLT 1742

  Fly    86 --DLSVQVWDCALGEAVIGHKAHQHQHEARDVRVVHHTTNSVLMSYLANGNILSMDASDLVIYCV 148
              |..:::||...|..|...||||:|                     ..|..||.|...|...|:
Mouse  1743 TFDGHLELWDLQHGCWVFQTKAHQYQ---------------------ITGCCLSPDRRLLATVCL 1786

  Fly   149 AS-----NTYCRRSTFISPRNHQLTMVRCSPYNDNLFAVGTAMGNVLVCDLRKMNIVYKFHGHKA 208
            ..     :|...:..|.......|..|...| ...:.|.|:..|::.......:.:..:......
Mouse  1787 GGYLKLWDTVRGQLAFQYTHPKSLNCVAFHP-EGQVVATGSWAGSITFFQADGLKVTKELGAPGP 1850

  Fly   209 PICGLAWREVPAAEDEKTNNLALSAEEWRSRNGGQEEKPKTKPPPLTKSKAAESDDPFDIYNFDH 273
            .:|.||:                                 .||..:.  .....|...:::    
Mouse  1851 SVCSLAF---------------------------------NKPGKIV--AVGRIDGTVELW---- 1876

  Fly   274 LEYEFGAPIAERRRKSSEDCGGEFVGLEKPAGAAVLDFVEACESVKAELLASRQEDKTQHVEVTL 338
             .::.||.:|    .....||.....|...||..   |:.|.|..||:|.:...           
Mouse  1877 -AWQEGARLA----AFPAQCGCVSAVLFLHAGDR---FLTAGEDGKAQLWSGFL----------- 1922

  Fly   339 HDCEPTKPTG-----PLSDASTISNKND----ASDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKR 394
                 .:|.|     |||.|.:::...|    |....|..:.:.:.||.|..          |:.
Mouse  1923 -----GRPRGCLGSLPLSPALSVALNPDGDQVAVGYREDGINIYKISSGSQG----------PQH 1972

  Fly   395 EVLH-----HIYHQAEVHASGTP-------QTKSEPQSNLQVVPAISAETISLTSVNSTHLETLL 447
            :.|:     .::....|..||..       ..|.:...:|.::.......:.|.:...     |:
Mouse  1973 QELNVAVSALVWLSPSVLVSGAEDGSLHGWMFKGDSLHSLWLLSRYQKPVLGLAASRE-----LM 2032

  Fly   448 VSIDGDEVMMIWN----TNTGAHAGKNYSKSKTAGKLNNV----YWLNNHVIVSLSR-HQLFFWS 503
            .:...|..:.:|.    |....||.:....::..|....|    :..:..::.:..| ..|..|.
Mouse  2033 AAASEDFTVRLWPRQLLTQPHVHAVELPCCAELRGHEGPVCCCSFSPDGGILATAGRDRNLLCWD 2097

  Fly   504 VEF-ERKMLRYKISKDKSHSCHLQDIVSFACDSSKEMIWL-CRNNRQIGMMNPKTGRMADFYGTV 566
            ::. :..:|.:..|     ||| :|.:: .|..:|:.|.: |.::..:|:.||:.|:....:...
Mouse  2098 MKIAQAPLLIHTFS-----SCH-RDWIT-GCAWTKDNILVSCSSDGSVGLWNPEAGQQLGQFSGH 2155

  Fly   567 AFGVRAMAECPDDMNKIALGCSDRRVAFFDISKLTTSCLPIDSVYVSSNVYCLAWSPNCLELAFG 631
            ...|.|:....:.:..::   .|..:..:|...:..:.:|..|..:|.   |.|    .||...|
Mouse  2156 QSAVSAVVAVEEHIVSVS---RDGTLKVWDHQGVELTSIPAHSGPISQ---CAA----ALEPRPG 2210

  Fly   632 TFDG------TVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDLRKSKIEPT 690
            ...|      |||:....::                  |  |.:.....|.|      :....|.
Mouse  2211 GQPGSELLVVTVGLDGATKL------------------W--HPLLVCQIRTL------QGHSGPV 2249

  Fly   691 IVNCISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDIAWCPLDSN 755
            .....|..       |.|.:.:||..:|:.:.....:.|:.|  |.|..    :|.:||.|  ..
Mouse  2250 TAAAASEA-------SGLLLTSDDSSVQLWQIPKEADDSYKP--RSSVA----ITAVAWAP--DG 2299

  Fly   756 KFAVSGNDRSVYVMEFQPTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTFHIEGKVCLWNC 820
            ...||||:.....:        |:.............::.:.|.......:|:  ....|..|..
Mouse  2300 SMVVSGNEAGELTL--------WQQAKAVATAQAPGRVSHLIWYSANSFFVLS--ANENVSEWQV 2354

  Fly   821 NAPEKPPLT-ITYHCPM-----W---CGMFL-PTNENIIMCSGKALSVELIDIKDALEGDEKSIC 875
            ...:....| .:.|...     |   .|:.| |..:::|:...   .|||:::|..  ....|||
Mouse  2355 GLRKGSTSTSSSLHLKRVLQEDWGVLTGLGLAPDGQSLILMKE---DVELLEMKPG--SIPSSIC 2414

  Fly   876 PKVDALLNVKWASKS-----LTQPYAPVLTAAEKKRQRR---------------------DQRKA 914
            .:.....::...||.     |.|..:.:|:..|:|....                     .|.|.
Mouse  2415 RRYGVHSSILCTSKEYGLFYLQQGDSGLLSILEQKESGEFEEILDFNLNLNNPNGSPVSITQAKP 2479

  Fly   915 AAKLEVDVANKD---------------------QKKIQESVTAVIDNPTNDKCTQETPVEEMLEA 958
            .::..:..|..|                     |||.::..|..::       |:.:|..|:..:
Mouse  2480 ESESSLLCATSDGMLWNLSECTSEGEWIVDNIWQKKAKKPKTQTLE-------TELSPHSELDFS 2537

  Fly   959 LSLDKEQNNRSAKECPK 975
            :....:..|..|::|.|
Mouse  2538 IDCWIDPTNLKAQQCKK 2554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 repeat 116..160 CDD:293791 7/48 (15%)
WD40 repeat 167..204 CDD:293791 6/36 (17%)
WD40 446..719 CDD:475233 51/289 (18%)
WD40 613..874 CDD:475233 49/276 (18%)
WD40 repeat 617..654 CDD:293791 9/42 (21%)
WD40 repeat 659..691 CDD:293791 5/31 (16%)
WD40 repeat 693..732 CDD:293791 7/38 (18%)
WD40 repeat 744..785 CDD:293791 9/40 (23%)
WD40 repeat 793..831 CDD:293791 5/38 (13%)
WD40 repeat 838..861 CDD:293791 6/23 (26%)
Tep1NP_033377.1 TEP1 N-terminal 1 1..30
TEP1_N 1..29 CDD:428450
TEP1 N-terminal 2 31..60
TEP1_N 31..59 CDD:428450
TEP1 N-terminal 3 61..90
TEP1_N 61..89 CDD:428450
TEP1 N-terminal 4 91..120
TEP1_N 91..119 CDD:428450
TROVE 230..685 CDD:461724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..412
DUF5920 696..898 CDD:466045
DUF4062 909..1017 CDD:463823
NACHT 1031..>1466 CDD:444362
NACHT 1171..1346 CDD:428606
WD 1 1420..1462
WD 2 1681..1720 11/35 (31%)
WD40 1683..2099 CDD:441893 92/520 (18%)
WD40 repeat 1687..1723 CDD:293791 9/35 (26%)
WD 3 1723..1761 10/43 (23%)
WD40 repeat 1729..1764 CDD:293791 8/40 (20%)
WD 4 1764..1803 11/59 (19%)
WD40 repeat 1769..1804 CDD:293791 8/34 (24%)
WD 5 1805..1844 6/39 (15%)
WD40 repeat 1811..1847 CDD:293791 5/36 (14%)
WD 6 1847..1886 9/82 (11%)
WD40 repeat 1852..1887 CDD:293791 9/78 (12%)
WD40 1856..2275 CDD:441893 90/546 (16%)
WD 7 1889..1930 13/59 (22%)
WD40 repeat 1895..1930 CDD:293791 11/53 (21%)
WD 8 1932..1971 10/48 (21%)
WD40 repeat 1937..2066 CDD:293791 21/143 (15%)
WD 9 1974..2013 5/38 (13%)
WD40 repeat 1979..2014 CDD:293791 5/34 (15%)
WD 10 2015..2054 5/43 (12%)
WD 11 2067..2106 5/38 (13%)
WD40 repeat 2072..2111 CDD:293791 5/38 (13%)
WD 12 2113..2151 11/39 (28%)
WD40 repeat 2118..2141 CDD:293791 5/23 (22%)
WD 13 2154..2191 4/39 (10%)
WD40 repeat 2159..2190 CDD:293791 4/33 (12%)
WD 14 2193..2241 13/74 (18%)
WD40 repeat 2198..2243 CDD:293791 14/77 (18%)
WD 15 2244..2282 7/44 (16%)
WD40 repeat 2250..2272 CDD:293791 6/28 (21%)
WD 16 2285..2324 11/52 (21%)
WD40 repeat 2290..2322 CDD:293791 9/41 (22%)
WD 17 2326..2362 4/37 (11%)
WD40 repeat 2330..2374 CDD:293791 6/45 (13%)
WD 18 2375..2424 12/53 (23%)
WD40 repeat 2380..2410 CDD:293791 8/34 (24%)
WD40 repeat 2420..2465 CDD:293791 7/44 (16%)
WD 19 2467..2507 4/39 (10%)
WD40 repeat 2472..2495 CDD:293791 4/22 (18%)
WD 20 2555..2592 186/1057 (18%)
WD 21 2594..2628
Blue background indicates that the domain is not in the aligned region.

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