DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and wda

DIOPT Version :10

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_061508903.1 Gene:wda / 1274182 VectorBaseID:AGAMI1_003820 Length:994 Species:Anopheles gambiae


Alignment Length:676 Identity:123/676 - (18%)
Similarity:217/676 - (32%) Gaps:201/676 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 AERRRKSSEDCGGEFVGLE----------KPAGAAVLDFVEACESVKAELLASRQEDK------- 330
            |.|...|:....|..|.:|          :||.....||.|..|         |:.::       
Mosquito   321 APRSSSSNGQLNGTSVPMEVDEGATPAQLRPAVEPEYDFTEHTE---------RENERYLLLNGF 376

  Fly   331 -TQHVEVTLHDCEPTKPTGPLSDASTISNKNDASDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKR 394
             .:::...:.|.|...|.......:|:..::|..|         :|.|...|....:...|:.::
Mosquito   377 NARYLRYKMLDAENGVPANDRLGGTTLLGEDDDED---------EYDSCMKDTQAAESGIAEQQQ 432

  Fly   395 EVLHHIYHQAEVHASGT---------PQTKSEPQSNLQVVPAISAETISL-------TSVNSTHL 443
            :      .|.:...|.|         |:..|  |..|:.:.. |||.:|:       .|:.:...
Mosquito   433 Q------QQQQQDGSVTGGVEMDGMFPRMSS--QERLRRLKE-SAERLSIYQRPLCVYSLENVGH 488

  Fly   444 ETLLVSID----------GDEVMMIWNTNTGAHAG-KNYSKSKTAGKLNNVYWLNNHVIVSLSRH 497
            :...|:||          .|..:|:|:||.....| |.|:.           |          |.
Mosquito   489 QLTSVAIDPGCCHVASGFEDSTIMLWSTNRSTQMGRKPYAS-----------W----------RD 532

  Fly   498 QLFFWSV---------------EF-----------ERKMLRYKISKDKSHSCHLQDIVSFACDSS 536
            :...|:|               |:           :.....::|:.:..|    :|..|...|..
Mosquito   533 RQCCWNVTSCDSRFSESDESDDEYGDDGADGAGRGDDHRPEHRIAGEDRH----RDGTSLLDDGI 593

  Fly   537 KEMIWLCRNNRQIGMMN----PKTGRMA----------------DFYGTVAFGVRAMAECPDD-- 579
            ..|..| :..:.|..||    |...|:.                .|..|....:|.......|  
Mosquito   594 DSMFDL-KTRKDIERMNKLLPPHKRRLTKRERWKQFLDHRCLENTFSETGGLCLRGHGNAVTDLL 657

  Fly   580 -------MNKIALGCSDRRVAFFDISKLTTSCLPIDSVYVSSN--VYCLAWSPNCLELAFGTFDG 635
                   :..:|..|:.|        ..|.|.....::|...|  ::|:|.||..|.||.|:.|.
Mosquito   658 FSDHSPLLVSVARDCTMR--------AWTGSDYTCRAIYRGHNHPIWCVAESPTGLYLATGSRDT 714

  Fly   636 TVGILDVERMKVKTHLRTPHKKEVYSLVWQDHFIYFIVNRVLGFFDL-------RKSKIEPTIVN 693
            |..:...:| :....:...|.::|.::.:..:..|.    ..|..||       ...|:.....:
Mosquito   715 TARLWSTDR-RFPLQMYVGHTQDVDAVAFHPNGNYL----ATGSTDLSVRLWCVTSGKLLRIFTD 774

  Fly   694 C---ISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDIAWCPLDSN 755
            |   :.|..: |....:|..|.::..::|.:..:|.:      :.:.......:|.|.| ..||.
Mosquito   775 CRQPVQRICF-SPDGKYLAAGGEENRVRIFDLTAGSQ------LTELKDHTAAITCITW-STDST 831

  Fly   756 KFAVSGNDRSVYVMEFQ-----------PTERNWKTLHTFTANTEKASITSMRWSHTQKHLLLTF 809
            .|..|..|.::.:.:.:           |:.....|. |.|:::..:|.||:....|.  |..|.
Mosquito   832 HFVSSCADGTIRIWDAKRMLLPSSSSSSPSSGGSSTT-TSTSSSSSSSSTSVLMGQTP--LASTT 893

  Fly   810 HIEGKVCLWNCNAPEKPPLTITYHCP 835
            .........| |....|.:.||.:.|
Mosquito   894 GRSNNAATLN-NGTSNPKMNITANIP 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 446..719 CDD:475233 62/350 (18%)
WD40 613..874 CDD:475233 50/246 (20%)
WD40 repeat 617..654 CDD:293791 11/36 (31%)
WD40 repeat 659..691 CDD:293791 6/38 (16%)
WD40 repeat 693..732 CDD:293791 7/41 (17%)
WD40 repeat 744..785 CDD:293791 11/51 (22%)
WD40 repeat 793..831 CDD:293791 8/37 (22%)
WD40 repeat 838..861 CDD:293791
wdaXP_061508903.1 None
Blue background indicates that the domain is not in the aligned region.

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